Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A07
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.5  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   7.9  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   7.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.9  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 110 HDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 217
           +D ++VGG      V   L +  N K L     PDE
Sbjct: 69  YDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPDE 104


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = +1

Query: 343 YDYAHQAQQHHPHEG 387
           + + H   Q+HPH G
Sbjct: 317 HPHQHHPSQYHPHRG 331


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 393 ASAFVGMVLLRLMSVVITPPAVSI 322
           ASA + +++   + V +TPP +S+
Sbjct: 319 ASAEIRLIVTAPLHVEVTPPLLSV 342


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 393 ASAFVGMVLLRLMSVVITPPAVSI 322
           ASA + +++   + V +TPP +S+
Sbjct: 319 ASAEIRLIVTAPLHVEVTPPLLSV 342


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 39  ICSDLQWSPSKSPSAMRRWTRPR 107
           I  D +W    +    R W+RPR
Sbjct: 29  ITGDEKWVVYNNIKRKRSWSRPR 51


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +3

Query: 39  ICSDLQWSPSKSPSAMRRWTRPR 107
           I  D +W    +    R W+RPR
Sbjct: 150 ITGDEKWVVYNNIKRKRSWSRPR 172


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 60  SPSKSPSAMRRWTRPRFTTSYSWAGPLAFLKCRSS 164
           SP+ SPS   +       T+ S  G    L+C +S
Sbjct: 740 SPNASPSPAEQCASTTTITARSPQGSQGLLQCATS 774


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,071
Number of Sequences: 438
Number of extensions: 2098
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)