Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A04
         (153 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    26   0.049
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   1.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       19   4.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   5.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    18   9.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          18   9.9  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 25.8 bits (54), Expect = 0.049
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +3

Query: 30  HFDYCLYYFIINNNNNSVRGSLYVYVYP 113
           H D+     I N NN S++G++ +++ P
Sbjct: 480 HADFSYTIVINNRNNTSMKGTVRIFIGP 507


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.4 bits (43), Expect = 1.1
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = +3

Query: 63  NNNNNSVRGSLYVYVYPVV-YKGN 131
           NNNN +     Y++V PV   KGN
Sbjct: 138 NNNNTNKYKDYYIWVDPVKDDKGN 161


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 54 FIINNNNN 77
          FII NNNN
Sbjct: 33 FIIQNNNN 40


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 120 ILLDKHTHIKNRVR 79
           I LD++ HIK+ +R
Sbjct: 119 ISLDRYIHIKDPLR 132


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 51  YFIINNNNNSVRGSLYVYVYP 113
           Y IIN   N  + S+  Y YP
Sbjct: 360 YDIINIQENGDQVSVGRYFYP 380


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 63  NNNNNSVRGS 92
           NNNNN+  G+
Sbjct: 245 NNNNNNNNGA 254


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,934
Number of Sequences: 438
Number of extensions: 383
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2664060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)