Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0023_A03
         (346 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042681-1|AAH42681.2|  402|Homo sapiens zinc finger protein 547...    31   1.3  
AK055662-1|BAB70979.1|  353|Homo sapiens protein ( Homo sapiens ...    31   1.3  

>BC042681-1|AAH42681.2|  402|Homo sapiens zinc finger protein 547
           protein.
          Length = 402

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 87  RLF*WAIRIITVSSTETRRIAHGRTETGRFFRVNS 191
           +LF W+  +IT     T +  +G +E G+FF+ NS
Sbjct: 247 KLFMWSSTLITHQRVHTGKRPYGCSECGKFFKCNS 281


>AK055662-1|BAB70979.1|  353|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31100 fis, clone IMR321000242, weakly similar to
           ZINC FINGER PROTEIN 33A. ).
          Length = 353

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +3

Query: 87  RLF*WAIRIITVSSTETRRIAHGRTETGRFFRVNS 191
           +LF W+  +IT     T +  +G +E G+FF+ NS
Sbjct: 247 KLFMWSSTLITHQRVHTGKRPYGCSECGKFFKCNS 281


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,784,725
Number of Sequences: 237096
Number of extensions: 866248
Number of successful extensions: 1255
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)