Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A02
(217 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 77 1e-14
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 77 1e-14
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 77 1e-14
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 77 1e-14
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 73 2e-13
AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens ... 29 2.0
AL050372-1|CAB62530.1| 151|Homo sapiens hypothetical protein pr... 28 6.2
U26710-1|AAB09291.1| 982|Homo sapiens cbl-b protein. 27 8.3
BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, mem... 27 8.3
BC032851-1|AAH32851.1| 982|Homo sapiens Cas-Br-M (murine) ecotr... 27 8.3
AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein. 27 8.3
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 221 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 280
Query: 206 PKM 214
KM
Sbjct: 281 HKM 283
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 236 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 295
Query: 206 PKM 214
KM
Sbjct: 296 HKM 298
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IWT+SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWTESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
KM
Sbjct: 282 HKM 284
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 72.9 bits (171), Expect = 2e-13
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGI + APGGH+GRF IW +SAF +LD LYG+W+ + K N+NLP
Sbjct: 222 RNIPGITLLNVSKLNILKLAPGGHVGRFCIWIESAFRKLDELYGTWRKAASLKSNYNLPM 281
Query: 206 PKM 214
+M
Sbjct: 282 HEM 284
>AK075043-1|BAC11370.1| 265|Homo sapiens protein ( Homo sapiens
cDNA FLJ90562 fis, clone OVARC1001163. ).
Length = 265
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 31 HPWHRDAQREQAEPPEAGTRRPSRQVHHL--DQVRFR*A*PAVRLVEDTIEGEE-ELQSA 201
HP D +REQA AG R P ++HHL D VR R PA+ L + EE E S
Sbjct: 135 HPGGGDQRREQAGGWHAGRRLP--ELHHLRGDAVRLR--GPALCLPLPGVRREEGEFTSP 190
Query: 202 P 204
P
Sbjct: 191 P 191
>AL050372-1|CAB62530.1| 151|Homo sapiens hypothetical protein
protein.
Length = 151
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = -2
Query: 213 IFGWGRLKFFFSFDGVFHEPYSGSSLSKADLVQMMNLPRWPPG--ASFRRFSLFTLSISM 40
+F G F +F G F +P G DLV ++ LP+W G A + L LS +
Sbjct: 87 LFSDGGHTFLQNFKGDFVDPCLG------DLVSILKLPQWLKGLLAFLVKPLLPRLSAFL 140
Query: 39 PGMFRICTSQP 7
M CT++P
Sbjct: 141 SNMKSRCTAKP 151
>U26710-1|AAB09291.1| 982|Homo sapiens cbl-b protein.
Length = 982
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 7 RLTRAYPEHPWHRDAQREQAEPPEAGTRRPSRQVHH 114
R ++ Y + P D + A PP+ RR + ++HH
Sbjct: 884 RTSQDYDQLPSCSDGSQAPARPPKPRPRRTAPEIHH 919
>BC146758-1|AAI46759.1| 1266|Homo sapiens TBC1 domain family, member 9
(with GRAM domain) protein.
Length = 1266
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 163 PRAVQRVKPIESGLGPDDEPAEMAAGCQLQEVQL 62
P V+ V+P+ + L PD E E + G Q+++++L
Sbjct: 1104 PYVVESVEPLPASLAPDSE--EHSLGGQMEDIKL 1135
>BC032851-1|AAH32851.1| 982|Homo sapiens Cas-Br-M (murine)
ecotropic retroviral transforming sequence b protein.
Length = 982
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +1
Query: 7 RLTRAYPEHPWHRDAQREQAEPPEAGTRRPSRQVHH 114
R ++ Y + P D + A PP+ RR + ++HH
Sbjct: 884 RTSQDYDQLPSCSDGSQAPARPPKPRPRRTAPEIHH 919
>AB020689-1|BAA74905.2| 1291|Homo sapiens KIAA0882 protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -1
Query: 163 PRAVQRVKPIESGLGPDDEPAEMAAGCQLQEVQL 62
P V+ V+P+ + L PD E E + G Q+++++L
Sbjct: 1129 PYVVESVEPLPASLAPDSE--EHSLGGQMEDIKL 1160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,588,082
Number of Sequences: 237096
Number of extensions: 552028
Number of successful extensions: 1751
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1751
length of database: 76,859,062
effective HSP length: 50
effective length of database: 65,004,262
effective search space used: 1365089502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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