Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A02
(217 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 89 8e-19
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 89 8e-19
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 89 8e-19
BT029144-1|ABJ17078.1| 423|Drosophila melanogaster RT01017p pro... 27 4.7
M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel... 26 6.2
M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel... 26 6.2
M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel... 26 6.2
M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel... 26 6.2
M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel... 26 6.2
M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel... 26 6.2
AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC... 26 6.2
AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB... 26 6.2
AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA... 26 6.2
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 89.0 bits (211), Expect = 8e-19
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGIE APGGH+GRF+IWT+SAF RL+ L+G+WK PS KK +NLPQ
Sbjct: 225 RNIPGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ 284
Query: 206 PKMA 217
PKMA
Sbjct: 285 PKMA 288
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 89.0 bits (211), Expect = 8e-19
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGIE APGGH+GRF+IWT+SAF RL+ L+G+WK PS KK +NLPQ
Sbjct: 225 RNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ 284
Query: 206 PKMA 217
PKMA
Sbjct: 285 PKMA 288
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 89.0 bits (211), Expect = 8e-19
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
RNIPGIE APGGH+GRF+IWT+SAF RL+ L+G+WK PS KK +NLPQ
Sbjct: 225 RNIPGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFGTWKKPSTLKKGYNLPQ 284
Query: 206 PKMA 217
PKMA
Sbjct: 285 PKMA 288
>BT029144-1|ABJ17078.1| 423|Drosophila melanogaster RT01017p
protein.
Length = 423
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +1
Query: 1 GTRLTRAYPEHPWHRDAQREQAEPPEAGTRRPSRQVHHLDQ 123
G+ +T + P H H D+ +Q + + ++ +Q H Q
Sbjct: 290 GSAVTESLPSHDLHSDSSSQQQQQQQQQQQQQHQQQQHQQQ 330
>M32078-6|AAB59190.1| 2110|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2110
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1709 GAKGIRTLLFALAMSLPALFNIC 1731
>M32078-5|AAB59191.1| 2123|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2123
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1722 GAKGIRTLLFALAMSLPALFNIC 1744
>M32078-4|AAB59192.1| 2077|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2077
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1676 GAKGIRTLLFALAMSLPALFNIC 1698
>M32078-3|AAB59193.1| 2118|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2118
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1717 GAKGIRTLLFALAMSLPALFNIC 1739
>M32078-2|AAB59194.1| 2121|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2121
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1720 GAKGIRTLLFALAMSLPALFNIC 1742
>M32078-1|AAB59195.1| 2131|Drosophila melanogaster sodium channel
alpha subunit protein.
Length = 2131
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1730 GAKGIRTLLFALAMSLPALFNIC 1752
>AE014298-2416|ABI30986.1| 2131|Drosophila melanogaster CG9907-PC,
isoform C protein.
Length = 2131
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1730 GAKGIRTLLFALAMSLPALFNIC 1752
>AE014298-2415|ABI30985.1| 2131|Drosophila melanogaster CG9907-PB,
isoform B protein.
Length = 2131
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1730 GAKGIRTLLFALAMSLPALFNIC 1752
>AE014298-2414|AAF48617.2| 2131|Drosophila melanogaster CG9907-PA,
isoform A protein.
Length = 2131
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 87 GASFRRFSLFTLSISMPGMFRIC 19
GA R LF L++S+P +F IC
Sbjct: 1730 GAKGIRTLLFALAMSLPALFNIC 1752
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,840,494
Number of Sequences: 53049
Number of extensions: 151204
Number of successful extensions: 667
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 24,988,368
effective HSP length: 51
effective length of database: 22,282,869
effective search space used: 445657380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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