Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A02
(217 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal pro... 66 3e-12
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 0.45
U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical pr... 27 1.4
U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam ... 27 1.4
U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam ... 27 1.4
U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam ... 27 1.4
U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam ... 27 1.4
Z69637-7|CAO78728.1| 433|Caenorhabditis elegans Hypothetical pr... 27 1.8
Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical pr... 27 1.8
AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian el... 26 3.2
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z72506-4|CAA96619.1| 590|Caenorhabditis elegans Hypothetical pr... 26 4.2
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 26 4.2
U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin... 26 4.2
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 26 4.2
U80836-14|AAB37896.1| 185|Caenorhabditis elegans Hypothetical p... 25 5.5
AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical ... 25 5.5
Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical pr... 25 7.3
U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein ... 25 7.3
U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein ... 25 7.3
U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein. 25 7.3
U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein. 25 7.3
U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with ta... 25 7.3
U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with ta... 25 7.3
U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with ta... 25 7.3
U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with ta... 25 7.3
AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidas... 25 7.3
AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical ... 25 7.3
AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein. 25 7.3
AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein. 25 7.3
AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical ... 25 9.7
>AF000196-2|AAC24253.1| 345|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 4 protein.
Length = 345
Score = 66.1 bits (154), Expect = 3e-12
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +2
Query: 26 RNIPGIEMXXXXXXXXXXXAPGGHLGRFIIWTKSAFDRLDPLYGSWKTPSKE-KKNFNLP 202
RNIPG+++ APGGHLGR IIWT+SAF +LD +YG+ S + KK +++P
Sbjct: 221 RNIPGVDVMNVERLNLLKLAPGGHLGRLIIWTESAFKKLDTIYGTTVANSSQLKKGWSVP 280
Query: 203 QPKMA 217
P MA
Sbjct: 281 LPIMA 285
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 0.45
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 34 PWHRDAQREQAEPPEAGTRRPSRQ 105
PW+ EPP G+RRPS+Q
Sbjct: 802 PWYSRDPIVNPEPPSVGSRRPSKQ 825
>U97194-9|AAB52452.1| 336|Caenorhabditis elegans Hypothetical
protein C37A2.8a protein.
Length = 336
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 1 GTRLTRAYPEHPWHRDAQREQAEPPEAGTRRP--SRQVHHLDQVR 129
GT+ R E W R+ REQ E G R HH ++ R
Sbjct: 156 GTKKRRIEEERAWERERYREQEEAAPIGFGRAPIPEHYHHSEEQR 200
>U49830-7|AAM98046.1| 774|Caenorhabditis elegans Neuronal igcam
protein 6, isoform c protein.
Length = 774
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 147 GSSLSKADLVQMMNLPRWPPGASFRR-FSLFTLSISMPGMF 28
GSS S A L + P +PP A R+ F+ F ++S+P +F
Sbjct: 102 GSSSSSALLTVKDSAPVFPPNAMSRKVFAAFGSTVSIPCIF 142
>U49830-6|AAK31481.1| 964|Caenorhabditis elegans Neuronal igcam
protein 6, isoform a protein.
Length = 964
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 147 GSSLSKADLVQMMNLPRWPPGASFRR-FSLFTLSISMPGMF 28
GSS S A L + P +PP A R+ F+ F ++S+P +F
Sbjct: 292 GSSSSSALLTVKDSAPVFPPNAMSRKVFAAFGSTVSIPCIF 332
>U49830-5|AAK31482.1| 1227|Caenorhabditis elegans Neuronal igcam
protein 6, isoform b protein.
Length = 1227
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 147 GSSLSKADLVQMMNLPRWPPGASFRR-FSLFTLSISMPGMF 28
GSS S A L + P +PP A R+ F+ F ++S+P +F
Sbjct: 555 GSSSSSALLTVKDSAPVFPPNAMSRKVFAAFGSTVSIPCIF 595
>U49830-4|AAU20850.1| 1196|Caenorhabditis elegans Neuronal igcam
protein 6, isoform d protein.
Length = 1196
Score = 27.5 bits (58), Expect = 1.4
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 147 GSSLSKADLVQMMNLPRWPPGASFRR-FSLFTLSISMPGMF 28
GSS S A L + P +PP A R+ F+ F ++S+P +F
Sbjct: 524 GSSSSSALLTVKDSAPVFPPNAMSRKVFAAFGSTVSIPCIF 564
>Z69637-7|CAO78728.1| 433|Caenorhabditis elegans Hypothetical
protein F35G2.1b protein.
Length = 433
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 141 SLSKADLVQMMNLPRWPPGASFRR 70
+LS + LVQM+N+ +P A FRR
Sbjct: 66 ALSNSPLVQMLNIRNFPTVALFRR 89
>Z69637-1|CAA93467.1| 601|Caenorhabditis elegans Hypothetical
protein F35G2.1a protein.
Length = 601
Score = 27.1 bits (57), Expect = 1.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -2
Query: 141 SLSKADLVQMMNLPRWPPGASFRR 70
+LS + LVQM+N+ +P A FRR
Sbjct: 234 ALSNSPLVQMLNIRNFPTVALFRR 257
>AF038613-11|AAB92054.2| 836|Caenorhabditis elegans Mammalian
elks/cast/erc/rab6 interactingprotein homolog protein 1
protein.
Length = 836
Score = 26.2 bits (55), Expect = 3.2
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 52 QREQAEPPEAGTRRPSRQVHHLDQVR 129
++E E E G R R H+DQVR
Sbjct: 486 EKEMTEKIEQGERERQRLAEHIDQVR 511
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 43 RDAQREQAEPPEAGTRRPSRQVHH 114
RD RE+ + PE +P VHH
Sbjct: 175 RDVVREELKDPETSFSKPPSVVHH 198
>Z72506-4|CAA96619.1| 590|Caenorhabditis elegans Hypothetical
protein F07A5.3 protein.
Length = 590
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -2
Query: 165 FHEPYSGSSLSKADLVQMMNLP 100
+HEPYSG++L + +Q +N+P
Sbjct: 459 YHEPYSGTTLKVVNRLQ-VNMP 479
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 196 IEVLLLLRWCLPRAVQRVKPIESGLGPDDEPAEMAA 89
I +LLL+ CLP Q +KP L D+ P + A
Sbjct: 5 ILLLLLVGACLPVFTQEIKPKPELLPADEAPKDPEA 40
>U56966-3|AAU05584.1| 332|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
b protein.
Length = 332
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 196 IEVLLLLRWCLPRAVQRVKPIESGLGPDDEPAEMAA 89
I +LLL+ CLP Q +KP L D+ P + A
Sbjct: 5 ILLLLLVGACLPVFTQEIKPKPELLPADEAPKDPEA 40
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 25.8 bits (54), Expect = 4.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 43 RDAQREQAEPPEAGTRRPSRQVHH 114
RD RE+ + PE +P VHH
Sbjct: 175 RDVVREELKDPETSFSKPPSVVHH 198
>U80836-14|AAB37896.1| 185|Caenorhabditis elegans Hypothetical
protein B0432.12 protein.
Length = 185
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 98 LGRFIIWTKSAFDRLDPLYGSWKTPSKEKKNFNLPQ 205
L + W + + +DP + WK P FN+PQ
Sbjct: 112 LSNVVQWLDNVAETIDPDW--WKIPGPSHIPFNMPQ 145
>AL132948-2|CAC51076.2| 496|Caenorhabditis elegans Hypothetical
protein Y39B6A.2 protein.
Length = 496
Score = 25.4 bits (53), Expect = 5.5
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -1
Query: 178 LRWCLPRAVQRVKPIESGLGPDDEPAEMAAGCQLQEVQLVHVEHLDARDVPDMHESASC 2
L W P+ + P + G+G P + C+ ++ V H + +MH + C
Sbjct: 383 LLWSDPQPINGRSPSKRGVGCQFGPDVTSKWCETNGIEYVVRSHEVKPEGYEMHHNGQC 441
>Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 31 HPWHRDAQREQAEPPEAG--TRRPSRQVHH 114
HP + Q +A+ P A T++PSRQ HH
Sbjct: 53 HP-NSPLQAPKAQEPAAAETTKKPSRQPHH 81
>Z49938-5|CAD31752.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 158 SWKTPSKEKKNFNLPQPK 211
SW+ PS+EK+N N+ K
Sbjct: 263 SWRPPSEEKRNGNITSYK 280
>Z49938-4|CAA90189.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 158 SWKTPSKEKKNFNLPQPK 211
SW+ PS+EK+N N+ K
Sbjct: 976 SWRPPSEEKRNGNITSYK 993
>Z46811-2|CAD31753.1| 1467|Caenorhabditis elegans Hypothetical
protein C09D8.1b protein.
Length = 1467
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 158 SWKTPSKEKKNFNLPQPK 211
SW+ PS+EK+N N+ K
Sbjct: 263 SWRPPSEEKRNGNITSYK 280
>Z46811-1|CAA86842.3| 2180|Caenorhabditis elegans Hypothetical protein
C09D8.1a protein.
Length = 2180
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 158 SWKTPSKEKKNFNLPQPK 211
SW+ PS+EK+N N+ K
Sbjct: 976 SWRPPSEEKRNGNITSYK 993
>U67967-1|AAC47829.1| 413|Caenorhabditis elegans PTL-1B protein
protein.
Length = 413
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 195 PSQPQHKTPQRSGIRPPTAILRQP 218
>U67966-1|AAB97090.1| 453|Caenorhabditis elegans PTL-1A protein
protein.
Length = 453
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 195 PSQPQHKTPQRSGIRPPTAILRQP 218
>U38983-1|AAA80687.1| 436|Caenorhabditis elegans TAU-1b protein.
Length = 436
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 173 PSQPQHKTPQRSGIRPPTAILRQP 196
>U38982-1|AAA80686.1| 431|Caenorhabditis elegans TAU-1a protein.
Length = 431
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 173 PSQPQHKTPQRSGIRPPTAILRQP 196
>U00051-5|AAM29696.1| 252|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform d protein.
Length = 252
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 47 PSQPQHKTPQRSGIRPPTAILRQP 70
>U00051-4|AAK70645.1| 453|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform a protein.
Length = 453
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 195 PSQPQHKTPQRSGIRPPTAILRQP 218
>U00051-3|AAK70647.1| 413|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform c protein.
Length = 413
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 195 PSQPQHKTPQRSGIRPPTAILRQP 218
>U00051-2|AAK70646.1| 458|Caenorhabditis elegans Protein with
tau-like repeats protein1, isoform b protein.
Length = 458
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 25 PEHPWHRDAQREQAEPPEAGTRRP 96
P P H+ QR PP A R+P
Sbjct: 195 PSQPQHKTPQRSGIRPPTAILRQP 218
>AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidase
protein.
Length = 591
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 31 HPWHRDAQREQAEPPEAG--TRRPSRQVHH 114
HP + Q +A+ P A T++PSRQ HH
Sbjct: 53 HP-NSPLQAPKAQEPAAAETTKKPSRQPHH 81
>AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 31 HPWHRDAQREQAEPPEAG--TRRPSRQVHH 114
HP + Q +A+ P A T++PSRQ HH
Sbjct: 53 HP-NSPLQAPKAQEPAAAETTKKPSRQPHH 81
>AF316540-1|AAK01633.1| 1487|Caenorhabditis elegans PTP-3B protein.
Length = 1487
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 158 SWKTPSKEKKNFNLPQPK 211
SW+ PS+EK+N N+ K
Sbjct: 263 SWRPPSEEKRNGNITSYK 280
>AF316539-1|AAK01632.1| 2200|Caenorhabditis elegans PTP-3A protein.
Length = 2200
Score = 25.0 bits (52), Expect = 7.3
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 158 SWKTPSKEKKNFNLPQPK 211
SW+ PS+EK+N N+ K
Sbjct: 976 SWRPPSEEKRNGNITSYK 993
>AF125960-1|AAD14735.1| 356|Caenorhabditis elegans Hypothetical
protein T12B3.3 protein.
Length = 356
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 67 QLVHVEHLDARDVPDMHESAS 5
Q H+E L RD MH+S+S
Sbjct: 334 QAAHLEELQKRDYMPMHKSSS 354
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,396,951
Number of Sequences: 27780
Number of extensions: 74356
Number of successful extensions: 279
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 12,740,198
effective HSP length: 51
effective length of database: 11,323,418
effective search space used: 226468360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -