Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A01
(271 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 95 5e-21
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 95 5e-21
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 95 5e-21
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 89 6e-19
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 41 2e-04
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 41 2e-04
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 41 2e-04
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 41 2e-04
03_01_0034 + 318432-318825,318902-319851 41 2e-04
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 41 2e-04
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 41 2e-04
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 41 2e-04
08_01_0373 - 3295130-3295264,3295707-3295834,3295905-3295981,329... 30 0.29
01_07_0301 + 42607239-42607277,42607374-42607577,42607669-426079... 29 0.51
09_02_0184 - 5485231-5485743 28 1.2
07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342 27 1.6
01_06_1580 - 38406740-38407257,38407481-38407552,38408309-384083... 27 2.1
10_02_0187 - 6447189-6448532 27 2.7
06_01_0430 - 3058832-3058952,3059590-3059795,3060103-3060294,306... 27 2.7
02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090 27 2.7
12_01_0314 - 2395113-2395760,2396151-2396738,2397218-2397252,239... 26 3.6
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 26 3.6
01_06_1440 + 37378121-37378958,37379344-37379494,37379567-373799... 26 3.6
12_01_0518 - 4093206-4094955,4095357-4095810,4095966-4096236,409... 25 6.3
06_03_0219 - 18227559-18227858,18227864-18228340 25 6.3
06_02_0001 - 10431189-10432634 25 6.3
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 25 6.3
01_06_0404 + 29098141-29098214,29098459-29098673,29099491-290995... 25 6.3
08_02_0480 + 17632176-17632814,17633838-17633906 25 8.3
05_06_0170 - 26124178-26124670,26124699-26124703 25 8.3
03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598 25 8.3
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 95.5 bits (227), Expect = 5e-21
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVD+ EFQTNLVPYP + L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M
Sbjct: 244 FDGALNVDVNEFQTNLVPYPRIHF-MLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 302
Score = 54.0 bits (124), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERPTYTNLNRL+ Q++SS+TASLR
Sbjct: 215 RSLDIERPTYTNLNRLVSQVISSLTASLR 243
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 95.5 bits (227), Expect = 5e-21
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGA+NVD+TEFQTNLVPYP + L +YAPVISAEKAYHEQLSV EITNA FEP++ M
Sbjct: 244 FDGAINVDVTEFQTNLVPYPRIHF-MLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMM 302
Score = 53.2 bits (122), Expect = 3e-08
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERPTYTNLNRLI QI+SS+T SLR
Sbjct: 215 RSLDIERPTYTNLNRLISQIISSLTTSLR 243
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 95.5 bits (227), Expect = 5e-21
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVD+ EFQTNLVPYP + L +YAPVISAEKAYHEQLSVAEITN+ FEP++ M
Sbjct: 244 FDGALNVDVNEFQTNLVPYPRIHF-MLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMM 302
Score = 54.0 bits (124), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERPTYTNLNRL+ Q++SS+TASLR
Sbjct: 215 RSLDIERPTYTNLNRLVSQVISSLTASLR 243
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 88.6 bits (210), Expect = 6e-19
Identities = 41/60 (68%), Positives = 49/60 (81%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGA+NVD+TEFQTNLVPYP + L +YAP+IS EKA+HEQ SV EITN+ FEPA+ M
Sbjct: 325 FDGAINVDITEFQTNLVPYPRIHF-MLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVM 383
Score = 52.8 bits (121), Expect = 4e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERPTYTNLNRLI Q++SS+T SLR
Sbjct: 296 RSLDIERPTYTNLNRLISQVISSLTTSLR 324
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 422 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 480
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 258 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 316
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 263 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 321
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 40.7 bits (91), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + NL+P+P + +V +AP+ S + L+V E+T ++ N M
Sbjct: 242 FPGQLNSDLRKLAVNLIPFPRLHFF-MVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
>08_01_0373 -
3295130-3295264,3295707-3295834,3295905-3295981,
3296283-3296377,3296463-3296591,3296698-3296786,
3296878-3297060,3297446-3297665,3297756-3297839
Length = 379
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +1
Query: 19 ERPTYTNLNRLIGQIVSSITASLRSTAPSMSI*RSSR 129
E PTY R + Q V + + LR T S+ I SSR
Sbjct: 146 ESPTYFTCQRHVNQTVQDVVSLLRCTRQSLGIMASSR 182
>01_07_0301 +
42607239-42607277,42607374-42607577,42607669-42607965,
42608055-42608222,42608393-42608560,42608653-42608733,
42608844-42608910,42609326-42609423,42609665-42609737,
42609826-42609896,42610013-42610062,42610145-42610257,
42610341-42610384
Length = 490
Score = 29.1 bits (62), Expect = 0.51
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2
Query: 41 SIVLSARSYHRLPPLCVRRRPQCRSNGVPDQLGALPTXIHFPTGHVRSSHLCREGLPRAA 220
++ +AR+ L PL PQC +PDQLG PT + VR + E LP +
Sbjct: 32 AVASAARTTSLLHPLPGLDVPQC----LPDQLGVQPTRVTTLPNGVR---VASEDLPGPS 84
Query: 221 LCSG 232
C G
Sbjct: 85 ACVG 88
>09_02_0184 - 5485231-5485743
Length = 170
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +2
Query: 92 RRRPQCRSNGVPDQLGALPTXIHFPTGHVRSS 187
RRRP+CRS GVP + G RSS
Sbjct: 22 RRRPRCRSPGVPRTAALVGAAAEAGGGRRRSS 53
>07_01_1049 - 9184559-9184888,9186534-9187003,9187279-9187342
Length = 287
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 8 AWILNARPTPTSIVLSARSYHRLPP 82
AW+ + P P+ + +A +HR PP
Sbjct: 100 AWLFDDYPPPSPVAAAAGMHHRQPP 124
>01_06_1580 -
38406740-38407257,38407481-38407552,38408309-38408365,
38408476-38408532,38408643-38408699,38408809-38408865,
38409371-38409424,38409744-38409800,38410023-38410076,
38412208-38412220,38413530-38413580,38414134-38414193,
38414640-38414761,38415033-38415894,38416468-38416667,
38417159-38417238,38417525-38417619
Length = 821
Score = 27.1 bits (57), Expect = 2.1
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +2
Query: 26 RPTPTSIVLSARSYHRLPPLCVRRRPQCRSNGVPDQLGALPTXIHFPTGHVRSS-HLCRE 202
RPT + A S H + QC + VP+ + L TGH+ S + E
Sbjct: 470 RPTVADLEEKAASIH--VDIVNHYATQCATGHVPNSVKVLMEDSRGATGHIADSVKVLME 527
Query: 203 GLPRAA 220
GLP A
Sbjct: 528 GLPGGA 533
>10_02_0187 - 6447189-6448532
Length = 447
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 244 AFVISATESCSW*AFSAEMTGAYVTSWEMDTXG*GTKL 131
AF ++++CSW + + +G +T+W++ G G L
Sbjct: 250 AFRSYSSDTCSWSMETKKTSGPKLTNWDLGKLGQGIVL 287
>06_01_0430 -
3058832-3058952,3059590-3059795,3060103-3060294,
3061241-3061287,3062233-3062455
Length = 262
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 77 PPLCVRRRPQCRSNGVPDQLGALPTXIHFPTGHVR 181
PPL + R C + PD G L H+ HVR
Sbjct: 227 PPLFSKLRTLCAAQQQPDSCGNLLAGAHYWIVHVR 261
>02_03_0006 - 13868590-13869593,13869887-13870156,13870487-13871090
Length = 625
Score = 26.6 bits (56), Expect = 2.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +2
Query: 20 NARPTPTSIVLSARSYHRLPPLCVRRRPQCRSNGVPDQLGAL 145
+A PTP V H PL + RRP+ +P +LG L
Sbjct: 404 SAEPTPLGPVQPPVRQHDPSPLAMLRRPKFGGIRLPIELGLL 445
>12_01_0314 -
2395113-2395760,2396151-2396738,2397218-2397252,
2397546-2397632,2397913-2397985,2398648-2398714,
2398795-2398931,2400196-2400217,2400733-2400807,
2402281-2402365,2402605-2403334
Length = 848
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 176 VRSSHLCREGLPRAALCSGDHERLLRARQ 262
V SS R GLPR A+C+ H + AR+
Sbjct: 191 VTSSRRRRRGLPRWAVCAVCHRSSMMARK 219
>04_04_0751 -
27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2
Query: 156 IXVGRAPSWSGTPL 115
I +GRA SW GTPL
Sbjct: 216 IGMGRASSWDGTPL 229
>01_06_1440 + 37378121-37378958,37379344-37379494,37379567-37379936,
37380021-37380431,37380522-37380820,37380897-37381155,
37381248-37381497,37381744-37381875,37381936-37382208,
37383023-37383267
Length = 1075
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 264 GWRARSKRS*SPLQRAARGKPSR 196
G R R + SPL+RAARG P++
Sbjct: 990 GRRDREHSTKSPLRRAARGPPAK 1012
>12_01_0518 -
4093206-4094955,4095357-4095810,4095966-4096236,
4096308-4096628
Length = 931
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -3
Query: 245 SVRDLRYRELLVVSLLGRDDWSVRDQLGNG 156
S + R+ LV+ +LGR V ++LG G
Sbjct: 347 SSKAARFVGFLVIEVLGRQQCKVEEELGKG 376
>06_03_0219 - 18227559-18227858,18227864-18228340
Length = 258
Score = 25.4 bits (53), Expect = 6.3
Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 23 ARPTPTSIVLSARSYHRLPPLCVRRRPQCRSNGVPDQLGALPTXIHFPTGH-VRSSHLCR 199
A P P L+ R R P L RRRP S P L P+G V S L
Sbjct: 97 ASPPPPPPRLALRFPRRPPELPPRRRPSRFS--APAASSRLSRLARAPSGRAVFSLGLAA 154
Query: 200 EGLPRAALCSGDHERLLRA 256
P ++ G H R + A
Sbjct: 155 TSSPSPSVSRGKHRRRVLA 173
>06_02_0001 - 10431189-10432634
Length = 481
Score = 25.4 bits (53), Expect = 6.3
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = -3
Query: 266 LVGGLEASVRDLRYRELLVVSLLGRDDWS-VRDQLGNGY 153
+ GLEAS R+ +L +++ RDD + +RD LG+G+
Sbjct: 306 IAAGLEAS--GSRFLWILKTTVVDRDDDAGIRDVLGDGF 342
>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 175 VTSWEMDTXG*GTKLVWNSVRSTLRAP 95
+T W++D G + WN+V ST +P
Sbjct: 956 LTHWKLDYTGNVSFRAWNNVSSTWTSP 982
>01_06_0404 +
29098141-29098214,29098459-29098673,29099491-29099596,
29099686-29100235,29100332-29100429,29100519-29100764,
29100867-29100981,29101092-29101305,29101402-29101991
Length = 735
Score = 25.4 bits (53), Expect = 6.3
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +2
Query: 113 SNGVPDQLGALPTXIHFPTGHVRSSHLCREGLPRAALCSGDHERLLRARQP 265
S + D+ GA T + +GHVRS GL S D+ L A +P
Sbjct: 547 SGKIRDETGAAATPFAYGSGHVRSVQALDPGLVYDT-TSADYADFLCALRP 596
>08_02_0480 + 17632176-17632814,17633838-17633906
Length = 235
Score = 25.0 bits (52), Expect = 8.3
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +2
Query: 80 PLCVRRRPQCRSNGVPDQLGALPTXIHFPTGHVRSSHLCREGLPRA-ALCSGDHERLLRA 256
P V RP ++ P+QL A P H +G S L +G AL G+ R
Sbjct: 36 PFAVAHRPPSSTSSPPEQLPAKPYG-HKDSGGGASLRLTAQGQGDCPALGGGNRPNPRRP 94
Query: 257 RQPDG 271
+P G
Sbjct: 95 ARPGG 99
>05_06_0170 - 26124178-26124670,26124699-26124703
Length = 165
Score = 25.0 bits (52), Expect = 8.3
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +2
Query: 44 IVLSARSYHRLPPLCVRRRPQCRSNGVPDQLGALPTXIHFPTGHVRSSHLCREGLPRAAL 223
+ L+AR R P + +G P+ AL +R H PRAA
Sbjct: 77 VALTARLCRRSPRIPSASAAAAAPDGYPELQAALEVHHLITASLLRRQHKLPPFAPRAAE 136
Query: 224 CSGDHER-LLRARQP 265
D ER R R+P
Sbjct: 137 QEHDEERGEARLREP 151
>03_05_0759 - 27500941-27501568,27503540-27504154,27504228-27504598
Length = 537
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +1
Query: 70 SITASLRSTAPSMSI*RSSRPTWCPTH 150
S T RST P+ S + P WC H
Sbjct: 432 SSTRRTRSTPPTSSASSMTSPRWCRPH 458
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,857,170
Number of Sequences: 37544
Number of extensions: 157977
Number of successful extensions: 426
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 14,793,348
effective HSP length: 68
effective length of database: 12,240,356
effective search space used: 257047476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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