Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0023_A01
(271 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 105 4e-24
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 103 2e-23
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 103 2e-23
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 103 2e-23
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 103 2e-23
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 99 4e-22
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 98 9e-22
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 98 9e-22
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 97 2e-21
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 97 2e-21
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 95 5e-21
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 95 5e-21
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 91 7e-20
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 90 2e-19
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 90 2e-19
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 79 6e-16
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 45 8e-06
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 45 8e-06
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 41 1e-04
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 40 2e-04
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 40 2e-04
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 40 2e-04
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 28 1.0
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 27 1.4
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 27 1.4
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 27 1.4
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 27 1.4
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 27 1.4
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 27 1.4
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 27 1.4
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 27 1.4
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 27 1.4
Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 2.4
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 2.4
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical pr... 25 5.6
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 25 7.3
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 25 7.3
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 25 7.3
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 25 7.3
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 25 9.7
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 25 9.7
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 25 9.7
U55369-10|AAK52180.2| 389|Caenorhabditis elegans Hypothetical p... 25 9.7
AF078790-3|AAC26933.1| 380|Caenorhabditis elegans Hypothetical ... 25 9.7
AC006681-4|AAK85495.1| 380|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 105 bits (252), Expect = 4e-24
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDLTEFQTNLVPYP + LVTYAP+ISAEKAYHEQLSV+EITN CFEP +QM
Sbjct: 244 FDGALNVDLTEFQTNLVPYPRIHFP-LVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQM 302
Score = 43.2 bits (97), Expect = 3e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 10 LDIERPTYTNLNRLIGQIVSSITASLR 90
L + PTYT+LNRL+ Q+VSSITASLR
Sbjct: 217 LGVRSPTYTHLNRLLAQVVSSITASLR 243
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 103 bits (247), Expect = 2e-23
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDLTEFQTNLVPYP + L T++PVISAEKAYHEQLSVAEITN CFEP NQM
Sbjct: 244 FDGALNVDLTEFQTNLVPYPRIHFP-LATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 302
Score = 56.8 bits (131), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERP+YTNLNRLIGQIVSSITASLR
Sbjct: 215 RNLDIERPSYTNLNRLIGQIVSSITASLR 243
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 103 bits (247), Expect = 2e-23
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDLTEFQTNLVPYP + L T++PVISAEKAYHEQLSVAEITN CFEP NQM
Sbjct: 243 FDGALNVDLTEFQTNLVPYPRIHFP-LATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 301
Score = 56.8 bits (131), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERP+YTNLNRLIGQIVSSITASLR
Sbjct: 214 RNLDIERPSYTNLNRLIGQIVSSITASLR 242
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 103 bits (247), Expect = 2e-23
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDLTEFQTNLVPYP + L T++PVISAEKAYHEQLSVAEITN CFEP NQM
Sbjct: 244 FDGALNVDLTEFQTNLVPYPRIHFP-LATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 302
Score = 56.8 bits (131), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERP+YTNLNRLIGQIVSSITASLR
Sbjct: 215 RNLDIERPSYTNLNRLIGQIVSSITASLR 243
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 103 bits (247), Expect = 2e-23
Identities = 49/60 (81%), Positives = 52/60 (86%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDLTEFQTNLVPYP + L T++PVISAEKAYHEQLSVAEITN CFEP NQM
Sbjct: 244 FDGALNVDLTEFQTNLVPYPRIHFP-LATFSPVISAEKAYHEQLSVAEITNMCFEPHNQM 302
Score = 56.8 bits (131), Expect = 2e-09
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LDIERP+YTNLNRLIGQIVSSITASLR
Sbjct: 215 RNLDIERPSYTNLNRLIGQIVSSITASLR 243
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 99.1 bits (236), Expect = 4e-22
Identities = 46/60 (76%), Positives = 50/60 (83%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDLTEFQTNLVPYP + L TYAP+ISAEKAYHEQ++VAEIT CFEP QM
Sbjct: 249 FDGALNVDLTEFQTNLVPYPRIHFP-LTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQM 307
Score = 51.6 bits (118), Expect = 7e-08
Identities = 22/29 (75%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD+ RPTYTNLNRLI Q++SS+TASLR
Sbjct: 220 RNLDLARPTYTNLNRLIAQVISSVTASLR 248
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 97.9 bits (233), Expect = 9e-22
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L Y P+ISAEKAYHE LSV++ITN+CFEPANQM
Sbjct: 242 FDGALNVDLNEFQTNLVPYPRIHFP-LAAYTPLISAEKAYHEALSVSDITNSCFEPANQM 300
Score = 52.8 bits (121), Expect = 3e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD+ERP+YTNLNR+I Q+VSSITASLR
Sbjct: 213 RNLDVERPSYTNLNRIISQVVSSITASLR 241
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 97.9 bits (233), Expect = 9e-22
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L Y P+ISAEKAYHE LSV++ITN+CFEPANQM
Sbjct: 242 FDGALNVDLNEFQTNLVPYPRIHFP-LAAYTPLISAEKAYHEALSVSDITNSCFEPANQM 300
Score = 52.8 bits (121), Expect = 3e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD+ERP+YTNLNR+I Q+VSSITASLR
Sbjct: 213 RNLDVERPSYTNLNRIISQVVSSITASLR 241
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.1 bits (231), Expect = 2e-21
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L +Y P+ISAEKAYHE LSV +ITN+CFEPANQM
Sbjct: 242 FDGALNVDLNEFQTNLVPYPRIHFP-LASYTPLISAEKAYHEALSVNDITNSCFEPANQM 300
Score = 51.6 bits (118), Expect = 7e-08
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD++RP+YTNLNR+I Q+VSSITASLR
Sbjct: 213 RNLDVDRPSYTNLNRIISQVVSSITASLR 241
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.1 bits (231), Expect = 2e-21
Identities = 45/60 (75%), Positives = 50/60 (83%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L +Y P+ISAEKAYHE LSV +ITN+CFEPANQM
Sbjct: 242 FDGALNVDLNEFQTNLVPYPRIHFP-LASYTPLISAEKAYHEALSVNDITNSCFEPANQM 300
Score = 51.6 bits (118), Expect = 7e-08
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD++RP+YTNLNR+I Q+VSSITASLR
Sbjct: 213 RNLDVDRPSYTNLNRIISQVVSSITASLR 241
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 95.5 bits (227), Expect = 5e-21
Identities = 44/60 (73%), Positives = 49/60 (81%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L Y P+ISA+KAYHE LSV +ITN+CFEPANQM
Sbjct: 242 FDGALNVDLNEFQTNLVPYPRIHFP-LAAYTPLISADKAYHEALSVNDITNSCFEPANQM 300
Score = 49.2 bits (112), Expect = 4e-07
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R L ++RP+YTNLNR+I Q+VSSITASLR
Sbjct: 213 RNLSVDRPSYTNLNRIISQVVSSITASLR 241
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 95.5 bits (227), Expect = 5e-21
Identities = 44/60 (73%), Positives = 49/60 (81%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L Y P+ISA+KAYHE LSV +ITN+CFEPANQM
Sbjct: 242 FDGALNVDLNEFQTNLVPYPRIHFP-LAAYTPLISADKAYHEALSVNDITNSCFEPANQM 300
Score = 49.2 bits (112), Expect = 4e-07
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R L ++RP+YTNLNR+I Q+VSSITASLR
Sbjct: 213 RNLSVDRPSYTNLNRIISQVVSSITASLR 241
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 91.5 bits (217), Expect = 7e-20
Identities = 43/60 (71%), Positives = 49/60 (81%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + L TYAPVISA++A+HE LSV +IT+ CFE ANQM
Sbjct: 247 FDGALNVDLNEFQTNLVPYPRIHFP-LATYAPVISADRAHHEPLSVQDITHMCFEKANQM 305
Score = 47.2 bits (107), Expect = 2e-06
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 10 LDIERPTYTNLNRLIGQIVSSITASLR 90
L +ERP+Y+NLNRLI Q+VSSITASLR
Sbjct: 220 LHVERPSYSNLNRLIAQVVSSITASLR 246
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 89.8 bits (213), Expect = 2e-19
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F+GALNVDLTEFQTNLVPYP + LVTYAP++SAE+A HEQ +V+++T+ACFEP QM
Sbjct: 250 FEGALNVDLTEFQTNLVPYPRIHFP-LVTYAPLVSAERASHEQNTVSDMTHACFEPGYQM 308
Score = 52.0 bits (119), Expect = 6e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD+ RPTYTNLNRL+ QI+SSITASLR
Sbjct: 221 RNLDLARPTYTNLNRLVAQIISSITASLR 249
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 89.8 bits (213), Expect = 2e-19
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F+GALNVDLTEFQTNLVPYP + LVTYAP++SAE+A HEQ +V+++T+ACFEP QM
Sbjct: 222 FEGALNVDLTEFQTNLVPYPRIHFP-LVTYAPLVSAERASHEQNTVSDMTHACFEPGYQM 280
Score = 52.0 bits (119), Expect = 6e-08
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R LD+ RPTYTNLNRL+ QI+SSITASLR
Sbjct: 193 RNLDLARPTYTNLNRLVAQIISSITASLR 221
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 78.6 bits (185), Expect = 6e-16
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
FDGALNVDL EFQTNLVPYP + LV Y P+IS+ A+HE LSV EIT +CFE +NQM
Sbjct: 241 FDGALNVDLNEFQTNLVPYPRIHF-PLVAYNPLISS--AHHEFLSVDEITKSCFEASNQM 297
Score = 47.2 bits (107), Expect = 2e-06
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 4 RGLDIERPTYTNLNRLIGQIVSSITASLR 90
R L + RPTY NLNR+I Q+VSSITASLR
Sbjct: 212 RNLRVSRPTYNNLNRIISQVVSSITASLR 240
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 44.8 bits (101), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + N+VP+P + + +AP+ S + ++V E+T CF+ N M
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFF-MPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMM 300
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 44.8 bits (101), Expect = 8e-06
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + N+VP+P + + +AP+ S + ++V E+T CF+ N M
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFF-MPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMM 300
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 41.1 bits (92), Expect = 1e-04
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + N+VP+P + + +AP+ S + L+V E+T F+ N M
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFF-MPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMM 300
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + N+VP+P + + +AP+ + + L+VAE+T F+ N M
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFF-MPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMM 300
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + N+VP+P + + +AP+ + + L+VAE+T F+ N M
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFF-MPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMM 300
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 40.3 bits (90), Expect = 2e-04
Identities = 20/60 (33%), Positives = 32/60 (53%)
Frame = +3
Query: 90 FDGALNVDLTEFQTNLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
F G LN DL + N+VP+P + + +AP+ + + L+VAE+T F+ N M
Sbjct: 242 FPGQLNADLRKLAVNMVPFPRLHFF-MPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMM 300
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 1.0
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 64 VSSITASLRSTAPSMSI*RSSRPTWCPTH 150
+S+IT S+ ++ P+M+ S+ PT PTH
Sbjct: 525 LSTITGSIVTSTPTMAPQTSASPTTTPTH 553
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 284 ALCMGNHELYMRRRKPD 300
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 284 ALCMGNHELYMRRRKPD 300
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 284 ALCMGNHELYMRRRKPD 300
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 218 ALCSGDHERLLRARQPD 268
ALC G+HE +R R+PD
Sbjct: 283 ALCMGNHELYMRRRKPD 299
>Z81129-3|CAB03404.1| 1262|Caenorhabditis elegans Hypothetical
protein T23F1.5 protein.
Length = 1262
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 25 PTYTNLNRLIGQIVSSITASLRSTAPSMSI*RSSRPTWCPTHXYPF 162
PTY L+ Q + T S RST P+ S+ R RP + + PF
Sbjct: 667 PTYIPLHPETSQSTPTPTTSARSTRPTASVTR--RPEFPTRNTPPF 710
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 132 NLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
+L P+P + Q +PV+ + + + SVA++T +P + M
Sbjct: 259 DLAPFPPMHFIQSAI-SPVVDPNENFTRKTSVADVTRFLLKPTSMM 303
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 132 NLVPYPXVSISQLVTYAPVISAEKAYHEQLSVAEITNACFEPANQM 269
+L P+P + Q +PV+ + + + SVA++T +P + M
Sbjct: 259 DLAPFPPMHFIQSAI-SPVVDPNENFTRKTSVADVTRFLLKPTSMM 303
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical
protein F21G4.6 protein.
Length = 1885
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +3
Query: 165 QLVTYAPVISAEKAY--HEQLSVAEITNAC 248
QL+ Y +++ Y H S+AEIT+AC
Sbjct: 394 QLLEYLEIMAFRSLYSTHYDFSLAEITSAC 423
>Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical
protein F10F2.6 protein.
Length = 488
Score = 25.4 bits (53), Expect = 5.6
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +2
Query: 92 RRRPQCRSNGVPDQLGALPTXIHFPTGHVR 181
RRRP+C GV DQ+ T P R
Sbjct: 382 RRRPECIKLGVSDQIPGFDTDDSKPCARFR 411
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 221 LCSGDHERLLRARQPD 268
LC G H LR RQPD
Sbjct: 291 LCIGTHNLYLRRRQPD 306
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 221 LCSGDHERLLRARQPD 268
LC G H LR RQPD
Sbjct: 291 LCIGTHNLYLRRRQPD 306
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 221 LCSGDHERLLRARQPD 268
LC G H LR RQPD
Sbjct: 291 LCIGTHNLYLRRRQPD 306
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 41 SIVLSARSYHRLPPLCVRRRPQCR 112
SI S R H+ PPL R PQC+
Sbjct: 106 SIEGSRRQVHQEPPLRGSRLPQCK 129
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 20 NARPTPTSIVLSARSYHRLPPLCVRRRP--QCRSNGVPDQLGALP 148
+AR T T+ +++ RS R PP R+RP + G D+ G+ P
Sbjct: 278 SARAT-TASMMTGRSTFRQPPSTFRQRPPLTAGTTGSIDRPGSAP 321
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 20 NARPTPTSIVLSARSYHRLPPLCVRRRP--QCRSNGVPDQLGALP 148
+AR T T+ +++ RS R PP R+RP + G D+ G+ P
Sbjct: 278 SARAT-TASMMTGRSTFRQPPSTFRQRPPLTAGTTGSIDRPGSAP 321
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical
protein B0207.5 protein.
Length = 3279
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/28 (32%), Positives = 15/28 (53%)
Frame = +2
Query: 50 LSARSYHRLPPLCVRRRPQCRSNGVPDQ 133
L+ + Y R +C++ CR+ V DQ
Sbjct: 195 LTQKQYRRFEKVCLKDTKDCRNVNVKDQ 222
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 271 TIWLAGSKQAFVISATESCSW*AFSA 194
++WL SKQ VI A CS+ A +A
Sbjct: 231 SMWLYRSKQQIVIQAVILCSFHAVAA 256
>U55369-10|AAK52180.2| 389|Caenorhabditis elegans Hypothetical
protein C18C4.9 protein.
Length = 389
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 158 HFPTGHVRSSHLCREGLPRAALCSGDHERLLRARQ 262
H + H SS + + +PR+A HER Q
Sbjct: 17 HSKSAHHNSSRVTSDVIPRSASAISSHERFFSDSQ 51
>AF078790-3|AAC26933.1| 380|Caenorhabditis elegans Hypothetical
protein F36H12.9 protein.
Length = 380
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3
Query: 248 ASVRDLRYRELLVVSLLGRDDWSVRDQLGNGYXWVG 141
A+V+D R+ +V+ L+G++ W +R G+G +G
Sbjct: 89 ANVKD-RFN-FIVMKLIGKNLWDLRQDRGDGKFTMG 122
>AC006681-4|AAK85495.1| 380|Caenorhabditis elegans Hypothetical
protein R13H9.6 protein.
Length = 380
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = -3
Query: 248 ASVRDLRYRELLVVSLLGRDDWSVRDQLGNGYXWVG 141
A+V+D R+ +V+ L+G++ W +R G+G +G
Sbjct: 89 ANVKD-RFN-FIVMKLIGKNLWDLRQDRGDGKFTMG 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,131,744
Number of Sequences: 27780
Number of extensions: 114213
Number of successful extensions: 405
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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