Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P24
(285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 89 5e-19
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 44 2e-05
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 44 2e-05
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 40 2e-04
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 40 2e-04
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 36 0.004
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical... 34 0.019
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 33 0.025
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 33 0.033
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 33 0.044
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 33 0.044
Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical pr... 31 0.10
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 31 0.10
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 31 0.13
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 31 0.13
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 31 0.13
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 30 0.23
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 30 0.23
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 30 0.23
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 30 0.23
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 0.23
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 0.41
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 0.41
Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical p... 29 0.54
Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical p... 29 0.54
U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical pr... 29 0.54
Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical pr... 29 0.71
Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical p... 29 0.71
Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical p... 29 0.71
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 0.71
AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical ... 29 0.71
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 29 0.71
U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical pr... 28 0.94
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 28 1.2
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 1.2
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 1.2
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 28 1.2
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 27 1.6
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 1.6
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 1.6
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 27 2.2
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 27 2.2
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 27 2.2
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 27 2.2
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 27 2.2
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 27 2.2
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 27 2.2
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 27 2.9
AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical ... 27 2.9
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 27 2.9
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 27 2.9
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr... 26 3.8
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 26 5.0
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 26 5.0
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 26 5.0
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 25 6.6
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 25 6.6
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 25 6.6
Z81104-4|CAE17891.1| 303|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF039036-4|AAB94165.1| 331|Caenorhabditis elegans Serpentine re... 25 8.7
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 89.0 bits (211), Expect = 5e-19
Identities = 45/85 (52%), Positives = 58/85 (68%), Gaps = 5/85 (5%)
Frame = +1
Query: 46 MSETLKLRGTLCGHNGWITQIATNPKYPDM-ILSSSRDKTLIVWKLTR----DETNYGLP 210
+ E +KL GTL GH GW+TQIAT + +LSSSRDKT++VW + DE G P
Sbjct: 2 VQEQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRP 61
Query: 211 QKRLYGHSHFISDVVLSSDGDYALS 285
+ L GH+HF+SDVV+SSDG +ALS
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFALS 86
Score = 33.9 bits (74), Expect = 0.019
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +1
Query: 85 HNGWITQIATNPKYPD-MILSSSRDKTLIVWKL--TRDETNYGLPQKRLYGHSHFISDVV 255
H W++ + +P D +I+S+ DK + VW L R +TN+ GH+ +++ V
Sbjct: 153 HTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNH-------IGHTGYVNTVT 205
Query: 256 LSSDGDYALS 285
+S DG S
Sbjct: 206 VSPDGSLCAS 215
Score = 32.3 bits (70), Expect = 0.058
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 252
+L GHN +++ + + LS S DKTL +W L N G+ ++ H+ + V
Sbjct: 64 SLTGHNHFVSDVVISSD-GQFALSGSWDKTLRLWDL-----NQGVSTRQFISHTKDVLSV 117
Query: 253 VLSSDGDYALS 285
S+D +S
Sbjct: 118 AFSADNRQIVS 128
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
H +I QIA NP+ P+M +S S DKTL VWKL E+
Sbjct: 233 HAHYIMQIAVNPEDPEMFVSGSLDKTLKVWKLGEQES 269
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 43.6 bits (98), Expect = 2e-05
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +1
Query: 67 RGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
R +L GH G + +A NP P M++S D T+ VW L R ET
Sbjct: 558 RYSLVGHRGHVNAVAWNPADPTMLVSCGADATIRVWSLDRSET 600
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 252
TL H W+ +A +PK ++S + DKTL VW+L+ K + H HF+S V
Sbjct: 327 TLLAHENWVRGLAFHPK-GKYLISVADDKTLRVWELSAQRC-----MKAIEAHEHFVSTV 380
Query: 253 VLSSDGDYALS 285
+ ++
Sbjct: 381 AFHQTSPFVIT 391
Score = 35.1 bits (77), Expect = 0.008
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +1
Query: 52 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 231
ET +L TL GH + IA + ++ S S D ++ +W + Y K L GH
Sbjct: 136 ETGQLERTLKGHTDAVNDIAIDAAGKQLV-SCSSDLSIKLWDFGQ---TYDC-LKSLKGH 190
Query: 232 SHFISDVVLSSDGDYALS 285
H +S V GD+ LS
Sbjct: 191 EHTVSSVTFLPTGDFVLS 208
Score = 33.1 bits (72), Expect = 0.033
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +1
Query: 31 WGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP 210
W F + + LK +L GH ++ + P D +LS+SRD T+ W ++ T Y +
Sbjct: 175 WDFGQTYDCLK---SLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS---TGYCVY 227
Query: 211 QKRLYGHSHFISDVVLSSDG 270
R GH+ ++ + +S+DG
Sbjct: 228 TFR--GHNDWVRMIRISNDG 245
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 252
TL H W+ +A +PK ++S + DKTL VW+L+ K + H HF+S V
Sbjct: 327 TLLAHENWVRGLAFHPK-GKYLISVADDKTLRVWELSAQRC-----MKAIEAHEHFVSTV 380
Query: 253 VLSSDGDYALS 285
+ ++
Sbjct: 381 AFHQTSPFVIT 391
Score = 35.1 bits (77), Expect = 0.008
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = +1
Query: 52 ETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGH 231
ET +L TL GH + IA + ++ S S D ++ +W + Y K L GH
Sbjct: 136 ETGQLERTLKGHTDAVNDIAIDAAGKQLV-SCSSDLSIKLWDFGQ---TYDC-LKSLKGH 190
Query: 232 SHFISDVVLSSDGDYALS 285
H +S V GD+ LS
Sbjct: 191 EHTVSSVTFLPTGDFVLS 208
Score = 33.1 bits (72), Expect = 0.033
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +1
Query: 31 WGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLP 210
W F + + LK +L GH ++ + P D +LS+SRD T+ W ++ T Y +
Sbjct: 175 WDFGQTYDCLK---SLKGHEHTVSSVTFLPT-GDFVLSASRDHTIKQWDIS---TGYCVY 227
Query: 211 QKRLYGHSHFISDVVLSSDG 270
R GH+ ++ + +S+DG
Sbjct: 228 TFR--GHNDWVRMIRISNDG 245
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 36.3 bits (80), Expect = 0.004
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 207
GH ++ QIA NPK + ++S DKT+ VW+ + N+ L
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFTL 181
>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
protein Y45F10B.10 protein.
Length = 1592
Score = 33.9 bits (74), Expect = 0.019
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 264
H+ IT AT+PK + I + SRD +L +W++ + G + L GH + ++ +S
Sbjct: 1334 HSDEITCFATSPKGGNFIATGSRDMSLKIWQIDK-----GFLTQVLVGHENVVTCCCISF 1388
Query: 265 D 267
D
Sbjct: 1389 D 1389
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.025
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 130 DMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSSDGDYALS 285
D ++S D L VW + RDE Y L GH I+ + LS G + +S
Sbjct: 178 DQVISGGIDNVLKVWDMRRDEITY-----TLTGHRDTITGISLSPSGKFIIS 224
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 33.1 bits (72), Expect = 0.033
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 186
TL HN I Q++ +P Y ++ SS D +IVW +++
Sbjct: 303 TLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDISK 340
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 183
GH G + + NP P I SS L VW+++
Sbjct: 365 GHTGKVADFSWNPNRPWTICSSDEFNALQVWEVS 398
Score = 25.4 bits (53), Expect = 6.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
T GH + I NP ++ + S DKT+ +W +
Sbjct: 259 TAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDM 294
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 32.7 bits (71), Expect = 0.044
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 76 LCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVW 174
L GH+G + +++ +PKY ++ S+S DK +I+W
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 32.7 bits (71), Expect = 0.044
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 76 LCGHNGWITQIA-TNPKYPDMILSSSRDKTLIVW 174
L GH+G + +++ +PKY ++ S+S DK +I+W
Sbjct: 54 LVGHSGPVWKVSWAHPKYGGLLASASYDKKVIIW 87
>Z81523-5|CAB04240.2| 298|Caenorhabditis elegans Hypothetical
protein F32H2.4 protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.10
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK 216
H+ + Q+A + K P++ S+S D+ + VW + + + + + +
Sbjct: 46 HSSSVEQVACSEKQPNLFASASADRNICVWDIRQSKPTHRISNR 89
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 31.5 bits (68), Expect = 0.10
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVV 255
L GH +T + + +I S S+D+T+ +W+ D+ G+ + + GH+H+I+ +
Sbjct: 233 LSGHTASVTCLRWGGE--GLIYSGSQDRTVKMWRA--DD---GVMCRNMTGHAHWINTLA 285
Query: 256 LSSDGDYAL 282
L++ DYAL
Sbjct: 286 LNT--DYAL 292
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 31.1 bits (67), Expect = 0.13
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 64 LRGTLCGH-NGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETN 198
++ + GH NGW+ + NP + +S S DKT +W + +++
Sbjct: 358 VKQSFIGHQNGWVEAVKWNPLDTNQFVSVSTDKTAKMWDVRSSKSS 403
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.13
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 25 AHWGFIKMSETLKLR----GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 189
A W F K L +R GT G WI +A P Y D++ S S + L +WK++ +
Sbjct: 357 ALWSFWK-KRALHVRKQAHGTQNGSGRWIVALAVLP-YSDLLASGSNEGELKLWKISEN 413
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 31.1 bits (67), Expect = 0.13
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Frame = +1
Query: 25 AHWGFIKMSETLKLR----GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD 189
A W F K L +R GT G WI +A P Y D++ S S + L +WK++ +
Sbjct: 357 ALWSFWK-KRALHVRKQAHGTQNGSGRWIVALAVLP-YSDLLASGSNEGELKLWKISEN 413
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 30.3 bits (65), Expect = 0.23
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLY-GHSHFISD 249
L GH ++ NP +ILS+S D+T+ W + ++ G L K ++ GH + D
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 250 V 252
V
Sbjct: 228 V 228
Score = 29.1 bits (62), Expect = 0.54
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 180
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 252
+L GH + +A +P P + S +RD + +W L E Q L H ++D+
Sbjct: 61 SLDGHVDGVQVLAKHPNRPSTVFSGARDGQVKIWNLASREC-----QATLDAHRGLVNDI 115
Query: 253 VLSSD 267
+ ++
Sbjct: 116 SIDNN 120
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 30.3 bits (65), Expect = 0.23
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLY-GHSHFISD 249
L GH ++ NP +ILS+S D+T+ W + ++ G L K ++ GH + D
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 250 V 252
V
Sbjct: 228 V 228
Score = 29.1 bits (62), Expect = 0.54
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 180
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 30.3 bits (65), Expect = 0.23
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYG-LPQKRLY-GHSHFISD 249
L GH ++ NP +ILS+S D+T+ W + ++ G L K ++ GH + D
Sbjct: 168 LKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVED 227
Query: 250 V 252
V
Sbjct: 228 V 228
Score = 29.1 bits (62), Expect = 0.54
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH I+ + NP P ++ S S D L VW++
Sbjct: 364 GHTAKISDFSWNPNEPWVVCSVSEDNILQVWQM 396
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSS-SRDKTLIVWKL 180
H+ + +A NP Y + IL++ S DKT+ +W L
Sbjct: 264 HSAEVNCLAFNP-YSEFILATGSADKTVALWDL 295
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 30.3 bits (65), Expect = 0.23
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
Frame = +1
Query: 10 VGW*AAHWGFIKMSETLKLRGTLCGHNGWITQIATN-PKYPDMILSSSRDKTLIVWKLTR 186
VGW W F SE K+ I++ N P + + I+++S T+ VW T
Sbjct: 467 VGWIIMLWEFQGFSENRKISDV--STKKIISKREINIPNFQNTIVTASTSGTISVWDYTE 524
Query: 187 DETNYGLPQKRLYGHSHFISDVVLSSDGDY 276
+ L + R + + S + +DG +
Sbjct: 525 KDVREDLERSRNWQEAEIRSISNIQADGKF 554
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 192
L GH I ++ + Y ILSS D+T+ +W L+R+E
Sbjct: 713 LKGHTADILDVSWSKNY--FILSSGMDRTVKLWHLSRNE 749
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 0.41
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDE 192
L GH I ++ + Y ILSS D+T+ +W L+R+E
Sbjct: 713 LKGHTADILDVSWSKNY--FILSSGMDRTVKLWHLSRNE 749
>Z66515-12|CAC42333.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.54
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 49 SETLKLRGTLC-GHNGWITQIATNPKYPDMILSSSRDKTLIVW 174
S + + +C GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 151 SSSFTFQTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>Z48178-11|CAC42247.1| 860|Caenorhabditis elegans Hypothetical
protein C05C10.6b protein.
Length = 860
Score = 29.1 bits (62), Expect = 0.54
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 49 SETLKLRGTLC-GHNGWITQIATNPKYPDMILSSSRDKTLIVW 174
S + + +C GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 151 SSSFTFQTIVCPGHTLSVWALASFPDLPNTYLSASADKTIRMW 193
>U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical
protein C33H5.7 protein.
Length = 326
Score = 29.1 bits (62), Expect = 0.54
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH+ +T I +P DM LS + DKT+ +W L
Sbjct: 110 GHDKLVTGINVSPM-DDMFLSVAEDKTIRLWDL 141
>Z93390-7|CAB07677.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 28.7 bits (61), Expect = 0.71
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 55 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 234
++K L GH+ IT + + + +++S+SRD T++VW L+ LP+ H
Sbjct: 574 SMKKLSVLNGHSDAITCLVSCQSHA-VLVSASRDLTVLVWHLSEMFLIRQLPK-----HP 627
Query: 235 HFISDVVLS-SDGDYA 279
H + V ++ + GD A
Sbjct: 628 HAVLAVAVNDATGDIA 643
>Z66515-11|CAA91354.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVW 174
GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>Z48178-10|CAA88206.1| 858|Caenorhabditis elegans Hypothetical
protein C05C10.6a protein.
Length = 858
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVW 174
GH + +A+ P P+ LS+S DKT+ +W
Sbjct: 161 GHTLSVWALASFPDLPNTYLSASADKTIRMW 191
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.7 bits (61), Expect = 0.71
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWK----LTRDETNYGL 207
GH+ W+ + ++L++S DKT I+WK L RD+ G+
Sbjct: 285 GHDDWVHSTVWSND-GRVLLTASSDKTCIIWKEIDNLWRDDVRLGI 329
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 67 RGTLCGHNGWITQIATNPKYPDMILSSSRDKT 162
+ + GH +TQIA NP +L+ SRD+T
Sbjct: 601 KSEIIGHQLTVTQIAWNPS-GTRLLTVSRDRT 631
Score = 25.0 bits (52), Expect = 8.7
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPD--MILSSSRDKTLIVWKL 180
++ GH WI IA N PD ++ S+ +D + +W +
Sbjct: 202 SVAGHTDWIHSIAFNDN-PDHLLVASAGQDTYVRLWAI 238
>AL032675-2|CAA21780.1| 931|Caenorhabditis elegans Hypothetical
protein VT23B5.2 protein.
Length = 931
Score = 28.7 bits (61), Expect = 0.71
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 55 TLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHS 234
++K L GH+ IT + + + +++S+SRD T++VW L+ LP+ H
Sbjct: 574 SMKKLSVLNGHSDAITCLVSCQSHA-VLVSASRDLTVLVWHLSEMFLIRQLPK-----HP 627
Query: 235 HFISDVVLS-SDGDYA 279
H + V ++ + GD A
Sbjct: 628 HAVLAVAVNDATGDIA 643
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 28.7 bits (61), Expect = 0.71
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTR 186
GH ++ + +P D+ILS+S DK++ VW + +
Sbjct: 249 GHYNNVSSVIFHPN-ADLILSNSEDKSIRVWDMQK 282
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 76 LCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT 183
L GHN ++ +P D++ S+S D+T+ VW ++
Sbjct: 133 LTGHNHYVMCAQFHPT-EDLVASASLDQTVRVWDIS 167
>U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical
protein C33H5.6 protein.
Length = 248
Score = 28.3 bits (60), Expect = 0.94
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFIS 246
GH + I TNPK + LSSS D + ++ TR NYG L GH+ I+
Sbjct: 109 GHRMPVNFIRTNPKDREKFLSSSVDGEIRMFD-TRTFENYGC---LLAGHTPLIA 159
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLT----RDETNYGLPQKRLYGHSHFISD 249
GH + + + ++ S S+D ++I W+L D + +P GH++ ++
Sbjct: 358 GHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTVTA 417
Query: 250 VVLSSDG 270
+ +S+ G
Sbjct: 418 LAISNTG 424
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 70 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKR 219
G GH +T + + +LS+S+D+T+ VW L + G+ R
Sbjct: 312 GVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRKFSNMSGVEATR 360
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +1
Query: 70 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKR 219
G GH +T + + +LS+S+D+T+ VW L + G+ R
Sbjct: 353 GVFAGHRDGVTHVDSRQD-ERYLLSNSKDQTIKVWDLRKFSNMSGVEATR 401
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 27.9 bits (59), Expect = 1.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 3 TRRWLVSCSLGIYKNE*NIKTQRHALWP*WLDYSNCD 113
TRR +++CS ++ E RH +P W+D D
Sbjct: 396 TRRQVIACSATLHNFEVCRFADRHMSFPQWIDLKGAD 432
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 27.5 bits (58), Expect = 1.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH G + I P+ +++ S D T+ +W +
Sbjct: 342 GHTGQVRAITVEPERGELLASGGEDGTVRIWMI 374
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
GH +T ++ N Y I+SSS D T+ +W L T
Sbjct: 363 GHQDSVTSVSFNTDY--RIVSSSDDATVKIWDLRNMRT 398
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
GH +T ++ N Y I+SSS D T+ +W L T
Sbjct: 361 GHQDSVTSVSFNTDY--RIVSSSDDATVKIWDLRNMRT 396
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 27.1 bits (57), Expect = 2.2
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = +1
Query: 73 TLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDV 252
T+ H +T++ + ++S+S D TL +W T + P ++L GH I V
Sbjct: 417 TMPAHTSVVTRVRADAA-GQYLVSASFDCTLKMWSTTGWQ-----PLRQLQGHDTRILCV 470
Query: 253 VLSSDGDYALS 285
+S DG + S
Sbjct: 471 DISPDGQWMCS 481
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLYGHSHFISDVVLSS 264
H+G I + P+ I+S S D T+ W L +++ + +GH + + +
Sbjct: 92 HDGAIMDVVGVPQKESQIVSISGDSTIRCWDL--NQSTLDRKSQVFFGHEGSVRSICFAP 149
Query: 265 D 267
D
Sbjct: 150 D 150
Score = 25.4 bits (53), Expect = 6.6
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH G + I P P++ ++ RD + +W +
Sbjct: 137 GHEGSVRSICFAPDDPNVFVTGGRDFQVKIWDM 169
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 184 RDETNYGLPQKRLYGHSHFISDVVLSSDGDYALS 285
RD+ Y + + +G +++ D L DG Y +S
Sbjct: 1126 RDDNEYSMRESVRHGSQYYLGDQPLYEDGRYKIS 1159
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 184 RDETNYGLPQKRLYGHSHFISDVVLSSDGDYALS 285
RD+ Y + + +G +++ D L DG Y +S
Sbjct: 1142 RDDNEYSMRESVRHGSQYYLGDQPLYEDGRYKIS 1175
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 25 AHWGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
A W + + + +R L GH + + + +Y I+S+S D+T+ VW +
Sbjct: 325 AVWDMVSPRD-ITIRRVLVGHRAAVNVVDFDDRY---IVSASGDRTIKVWSM 372
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 25 AHWGFIKMSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
A W + + + +R L GH + + + +Y I+S+S D+T+ VW +
Sbjct: 325 AVWDMVSPRD-ITIRRVLVGHRAAVNVVDFDDRY---IVSASGDRTIKVWSM 372
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 184 RDETNYGLPQKRLYGHSHFISDVVLSSDGDYALS 285
RD+ Y + + +G +++ D L DG Y +S
Sbjct: 1142 RDDNEYSMRESVRHGSQYYLGDQPLYEDGRYKIS 1175
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +1
Query: 70 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>AL034393-7|CAA22322.2| 337|Caenorhabditis elegans Hypothetical
protein Y18D10A.9 protein.
Length = 337
Score = 26.6 bits (56), Expect = 2.9
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +1
Query: 115 NPKYPDMILSSSRDKTLIVWKL 180
NPK+ +++ S+S D T+ +W+L
Sbjct: 314 NPKFSNLLTSASDDGTIRLWEL 335
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +1
Query: 70 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 26.6 bits (56), Expect = 2.9
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = +1
Query: 70 GTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDET 195
G + H + +++ + SRD+ + +WKL+RD +
Sbjct: 74 GIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHS 115
>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical
protein C03D6.4 protein.
Length = 1390
Score = 26.2 bits (55), Expect = 3.8
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 115 NPKYPDMILSSSRDKTLIVWKL 180
NP +PD +SS D++++V K+
Sbjct: 164 NPAFPDTFAASSTDRSILVAKI 185
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +1
Query: 61 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 207
KL GH GW+ + P S D+ + +W L + L
Sbjct: 175 KLYRVASGHTGWVRAVDVEPG-NQWFASGGADRIIKIWDLASGQLKLSL 222
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = +1
Query: 61 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGL 207
KL GH GW+ + P S D+ + +W L + L
Sbjct: 175 KLYRVASGHTGWVRAVDVEPG-NQWFASGGADRIIKIWDLASGQLKLSL 222
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 61 KLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
KL T GHN + + PK + LS S D + +W++
Sbjct: 266 KLVHTYRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEV 305
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +1
Query: 82 GHNGWITQIATNPKYPDMILSSSRDKTLIVWKL 180
GH + +A N ++ S DKT+++W L
Sbjct: 244 GHTDAVISLAWNRITTHVLASGGADKTVVLWDL 276
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 25.4 bits (53), Expect = 6.6
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 46 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 225
++ K L G I +AT P ++L + +K + +L TN + +L
Sbjct: 164 INANFKTVNNLIGCKDSIYSLATTPNL-SLVLGAGTEKCI---RLFDPRTNEKI--MKLR 217
Query: 226 GHSHFISDVVLSSDGDYALS 285
GH+ + +V++ DG ALS
Sbjct: 218 GHTDNVRALVVNDDGTRALS 237
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 25.4 bits (53), Expect = 6.6
Identities = 21/80 (26%), Positives = 37/80 (46%)
Frame = +1
Query: 46 MSETLKLRGTLCGHNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQKRLY 225
++ K L G I +AT P ++L + +K + +L TN + +L
Sbjct: 164 INANFKTVNNLIGCKDSIYSLATTPNL-SLVLGAGTEKCI---RLFDPRTNEKI--MKLR 217
Query: 226 GHSHFISDVVLSSDGDYALS 285
GH+ + +V++ DG ALS
Sbjct: 218 GHTDNVRALVVNDDGTRALS 237
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 25.4 bits (53), Expect = 6.6
Identities = 10/45 (22%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +1
Query: 85 HNGWITQIA-TNPKYPDMILSSSRDKTLIVWKLTRDETNYGLPQK 216
H G + ++ +P++ ++ + S D+T+++W+ + L QK
Sbjct: 61 HGGAVWRVIWAHPEFGQIVATCSYDRTIVIWEEQIVRSEKDLKQK 105
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 85 HNGWITQIATNPKYPDMILSSSRDKTLIVWKLTRD---ETNY-GLPQKRLYGH 231
HN IT + +P ++S D +W + + +TN G+P + ++ H
Sbjct: 366 HNSPITSVDWHPHETTTFMASGEDDQTTIWDIATEADGQTNIEGVPPQLMFVH 418
>Z81104-4|CAE17891.1| 303|Caenorhabditis elegans Hypothetical
protein M199.6 protein.
Length = 303
Score = 25.0 bits (52), Expect = 8.7
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 78 KRASEF*CFTHFYKSPVSSSPANASC 1
KR S CFT K+ V+ S A ASC
Sbjct: 139 KRESVNWCFTSVTKTDVTYSAAEASC 164
>AF039036-4|AAB94165.1| 331|Caenorhabditis elegans Serpentine
receptor, class h protein204 protein.
Length = 331
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 197 TTACHRSVCTVTPISFLTLYC 259
T A H VTPI L LYC
Sbjct: 19 TVAMHSITVIVTPIHLLGLYC 39
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,516,029
Number of Sequences: 27780
Number of extensions: 113646
Number of successful extensions: 337
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 270584450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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