Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P24
         (285 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   3.0  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   3.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   3.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   5.2  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       19   9.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            19   9.0  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 3.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 161 LLSCGS*LETKPTTACHRSVCT 226
           L+ CG   +T+  T   R  CT
Sbjct: 115 LMCCGRGYKTQEVTVVERCACT 136


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 129 RVFRISRNLSNPAIMATKRASEF*CFTHFYKSP 31
           R+F  S+N++       K    F  F  F K+P
Sbjct: 160 RIFTSSQNIAVIEYRIPKSGKGFSLFARFLKNP 192


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 3.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 114 SRNLSNPAIMATKRASEF*CFTHFYKSPVSSSPAN 10
           +R  S+P ++ T+  +EF     +YKS  S+ P N
Sbjct: 280 NRTNSDPRMILTEAYTEFNLTIKYYKSG-STVPFN 313


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 5.2
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +1

Query: 178 LTRDETNYGLPQKRLYGHSHFISDVVLSSDG 270
           LT+    +G+P   L+  +H +       DG
Sbjct: 430 LTKASATFGIPSTTLWQRAHRLGIDTPKKDG 460



 Score = 19.8 bits (39), Expect = 6.8
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 184 RDETNYGLPQKRLYG 228
           R  T +G+P   LYG
Sbjct: 541 RASTEFGIPTGTLYG 555


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -2

Query: 92  PLWPQSVPLSFNVSLIFINPQ*AAHQ 15
           P  P   P S N S + I+P    HQ
Sbjct: 48  PGGPPGAPPSQNPSQMMISPASGIHQ 73


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.4 bits (38), Expect = 9.0
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +1

Query: 94  WITQIATNPKYPDMI 138
           WIT+  T  ++ DM+
Sbjct: 87  WITRSGTREQFIDMV 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,391
Number of Sequences: 438
Number of extensions: 1418
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5619645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)