Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P23
(455 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 221 4e-58
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 221 4e-58
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 221 4e-58
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 188 3e-48
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 186 1e-47
AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p pro... 32 0.42
AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA... 32 0.42
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 3.9
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 29 3.9
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 29 3.9
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 29 3.9
BT011391-1|AAR96183.1| 374|Drosophila melanogaster AT28259p pro... 28 5.2
BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p pro... 27 9.1
AJ224690-1|CAA12074.1| 386|Drosophila melanogaster C-terminal b... 27 9.1
AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA... 27 9.1
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 221 bits (540), Expect = 4e-58
Identities = 108/146 (73%), Positives = 121/146 (82%), Gaps = 4/146 (2%)
Frame = +3
Query: 30 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 209
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 210 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 377
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 378 EDRSAYRRAPPAGAPHDKKADVGPGS 455
EDRSAYRRA P G+ DKK DVGPG+
Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGA 145
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 221 bits (540), Expect = 4e-58
Identities = 108/146 (73%), Positives = 121/146 (82%), Gaps = 4/146 (2%)
Frame = +3
Query: 30 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 209
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 210 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 377
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 378 EDRSAYRRAPPAGAPHDKKADVGPGS 455
EDRSAYRRA P G+ DKK DVGPG+
Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGA 145
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 221 bits (540), Expect = 4e-58
Identities = 108/146 (73%), Positives = 121/146 (82%), Gaps = 4/146 (2%)
Frame = +3
Query: 30 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 209
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 210 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 377
AWRH+YWYLTNEGIE LR +LHLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 378 EDRSAYRRAPPAGAPHDKKADVGPGS 455
EDRSAYRRA P G+ DKK DVGPG+
Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGA 145
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 188 bits (458), Expect = 3e-48
Identities = 95/147 (64%), Positives = 110/147 (74%), Gaps = 5/147 (3%)
Frame = +3
Query: 30 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 209
M +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 210 AWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPART 374
AWRHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P ++T
Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKT 120
Query: 375 AEDRSAYRRAPPAGAPHDKKADVGPGS 455
+DRS YRR P A DKK DVG G+
Sbjct: 121 DDDRSNYRRGPGAYG-MDKKGDVGAGT 146
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 186 bits (453), Expect = 1e-47
Identities = 94/145 (64%), Positives = 109/145 (75%), Gaps = 5/145 (3%)
Frame = +3
Query: 36 MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 215
+PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2 IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61
Query: 216 RHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAE 380
RHFYW LTNEGIE LR +LHLPPEIVP+TL ++ R+ VR RG G P ++T +
Sbjct: 62 RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDD 121
Query: 381 DRSAYRRAPPAGAPHDKKADVGPGS 455
DRS YRR P A DKK DVG G+
Sbjct: 122 DRSNYRRGPGAYG-MDKKGDVGAGT 145
>AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p
protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 277 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 188
KCR +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA
protein.
Length = 255
Score = 31.9 bits (69), Expect = 0.42
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -2
Query: 277 KCRKILRYSIPSFVKYQ*KCLHANCSLTYP 188
KCR +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
protein.
Length = 1640
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 758 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 793
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 233 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 126
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>BT011391-1|AAR96183.1| 374|Drosophila melanogaster AT28259p
protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 5/87 (5%)
Frame = +3
Query: 207 FAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRG--AVGRPDAPARTA- 377
F WR FY L E I L PP + K + + G + G+ A A A
Sbjct: 77 FFWRTFYDKLIEEEITVLEEVPRPPPTVPDKKGKGKKKGDARMAGGKSAGKAGASAGAAG 136
Query: 378 --EDRSAYRRAPPAGAPHDKKADVGPG 452
++ APPAG + +V G
Sbjct: 137 KGRKKAGQDAAPPAGGDQEAVEEVNTG 163
>BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p
protein.
Length = 620
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 288 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVG 446
+ A L+ SV+ + GA G+P + +D+ A P D K G
Sbjct: 319 LAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAG 371
>AJ224690-1|CAA12074.1| 386|Drosophila melanogaster C-terminal
binding protein protein.
Length = 386
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = +3
Query: 297 ATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGP 449
AT R + +RR VG R ++ + R PPA A A V P
Sbjct: 324 ATELREMAATEIRRAIVGNIPDVLRNCVNKEYFMRTPPAAAAGGVAASVYP 374
>AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA
protein.
Length = 1275
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 288 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVG 446
+ A L+ SV+ + GA G+P + +D+ A P D K G
Sbjct: 974 LAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAG 1026
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,596,626
Number of Sequences: 53049
Number of extensions: 403724
Number of successful extensions: 1197
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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