Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P22
         (232 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   0.49 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   1.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   2.0  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    20   3.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    20   3.5  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    20   3.5  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    20   4.6  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    19   6.1  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    19   6.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   6.1  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 0.49
 Identities = 18/66 (27%), Positives = 23/66 (34%)
 Frame = +3

Query: 12  GRCGRAGLRPECPAGGAVRPGRDALRGRQVLGQRRTALXXXXXXXXXXXXDALSHNTGSE 191
           G  G  GL    P G +  PG  A     +L +RR+               A S N+   
Sbjct: 139 GLHGLHGLSSSAPTGSSCGPG--AAAAAALLSKRRSVSECSLGTASSTSSTASSRNSDRS 196

Query: 192 ACRLSV 209
           A   SV
Sbjct: 197 AGSPSV 202



 Score = 19.0 bits (37), Expect = 8.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 71  GAHGPTGRAFGAQSRSSTPPG 9
           G HG  G +  A + SS  PG
Sbjct: 139 GLHGLHGLSSSAPTGSSCGPG 159


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 1.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 110 LTQDLASAQGVSSGAHGPT 54
           L QD++S   V  G  GPT
Sbjct: 353 LVQDISSPDAVEYGIIGPT 371


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = -3

Query: 167 CISSLRSAHCGTPSQSCSSLTQDLASAQGVSSGAHGPTGRA 45
           C+    S HCGT     S   + +A+A  V +     TG A
Sbjct: 13  CLICSPSVHCGTRPSFVSD--EMIATAASVVNACQTQTGVA 51


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +3

Query: 3   TRPGRCGR 26
           +RPG+CGR
Sbjct: 177 SRPGQCGR 184


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 15  RCGRAGLRPEC 47
           +C   G+RPEC
Sbjct: 246 KCLTVGMRPEC 256


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
          protein.
          Length = 72

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 15 RCGRAGLRPEC 47
          +C   G+RPEC
Sbjct: 43 KCLTVGMRPEC 53


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 175 TTPGQKPVDCP 207
           T  G+KP +CP
Sbjct: 3   THTGEKPFECP 13


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 186 TRCCGTVHLVAAVGALRHTVAEL 118
           T+C    HL  + GAL    AE+
Sbjct: 299 TKCVSGEHLSVSGGALNDCHAEV 321


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 34  CAPNARPVGPCAPD 75
           C P+ + V  CA D
Sbjct: 159 CVPSVKHVAKCATD 172


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.4 bits (38), Expect = 6.1
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +1

Query: 67  APDETPCADARSWVKDEQLCDGVPQCADRSDEMHCPTTPG 186
           A D TP       VK E+     P C      +   TTPG
Sbjct: 345 ALDRTPVTQGLLRVKKEEELQEAPSCGGGPTIL---TTPG 381


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.140    0.493 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,590
Number of Sequences: 438
Number of extensions: 1154
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3785850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)