Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P19
         (326 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   5.1  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    22   5.1  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    22   5.1  
AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.           22   6.8  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    22   6.8  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    21   8.9  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 72  GGEYVLYRTPVNISDASPISSSLV 1
           GGE+V+ R PV+  D S + +  V
Sbjct: 226 GGEHVVERYPVSQVDFSRVETPFV 249


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 170 MDYVSNQAQNYRTNNVIITM 229
           +DY+SN  +N R   V+ T+
Sbjct: 24  VDYISNYLENIRDRRVLPTV 43


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 170 MDYVSNQAQNYRTNNVIITM 229
           +DY+SN  +N R   V+ T+
Sbjct: 55  VDYISNYLENIRDRRVLPTV 74


>AY745233-1|AAU93512.1|  100|Anopheles gambiae SOD3B protein.
          Length = 100

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 124 SGLASLQCRRKDCVVYGLRE*SSSKLQDKQCNNNNGRGFH 243
           +GLA +Q   K   + G R      L   +  ++ GRG H
Sbjct: 29  TGLAKIQIANKKLTLVGDRSIIGRTLSISEYEDDLGRGKH 68


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 187 SSSKLQDKQCNNNNGRGFH 243
           SSS      CNN++  G H
Sbjct: 45  SSSSRNSSSCNNSSSSGTH 63


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 196 KLQDKQCNNNNGRG 237
           ++ DK C N NG G
Sbjct: 157 RMGDKCCRNGNGNG 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,630
Number of Sequences: 2352
Number of extensions: 5623
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22477884
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)