Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P15
         (349 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052043-1|AAK93467.1|  704|Drosophila melanogaster LP05645p pro...    27   6.5  
AE014296-1542|AAN11975.1|  704|Drosophila melanogaster CG5735-PD...    27   6.5  
AE014296-1541|AAF50351.1|  704|Drosophila melanogaster CG5735-PC...    27   6.5  
AE014296-1540|AAF50350.1|  704|Drosophila melanogaster CG5735-PB...    27   6.5  

>AY052043-1|AAK93467.1|  704|Drosophila melanogaster LP05645p
           protein.
          Length = 704

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 283 MSSFKLPPESVPTGSCSNEHVNLSGS 206
           M S KLP  +  T S S  + NLSGS
Sbjct: 1   MDSLKLPKANSATSSASGSNSNLSGS 26


>AE014296-1542|AAN11975.1|  704|Drosophila melanogaster CG5735-PD,
           isoform D protein.
          Length = 704

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 283 MSSFKLPPESVPTGSCSNEHVNLSGS 206
           M S KLP  +  T S S  + NLSGS
Sbjct: 1   MDSLKLPKANSATSSASGSNSNLSGS 26


>AE014296-1541|AAF50351.1|  704|Drosophila melanogaster CG5735-PC,
           isoform C protein.
          Length = 704

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 283 MSSFKLPPESVPTGSCSNEHVNLSGS 206
           M S KLP  +  T S S  + NLSGS
Sbjct: 1   MDSLKLPKANSATSSASGSNSNLSGS 26


>AE014296-1540|AAF50350.1|  704|Drosophila melanogaster CG5735-PB,
           isoform B protein.
          Length = 704

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 283 MSSFKLPPESVPTGSCSNEHVNLSGS 206
           M S KLP  +  T S S  + NLSGS
Sbjct: 1   MDSLKLPKANSATSSASGSNSNLSGS 26


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,445
Number of Sequences: 53049
Number of extensions: 298457
Number of successful extensions: 1053
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)