Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P13
         (254 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DF61 Cluster: Chromosome undetermined scaffold_49, wh...    35   0.31 
UniRef50_Q8SSE8 Cluster: HEAT-SHOCK PROTEIN HSP90 HOMOLOG; n=2; ...    33   0.96 
UniRef50_Q9URZ0 Cluster: Probable alpha-galactosidase precursor;...    31   5.1  
UniRef50_Q39KD4 Cluster: ResB-like/cytochrome c biosynthesis pro...    31   6.7  
UniRef50_Q2BC37 Cluster: Two-component sensor histidine kinase; ...    31   6.7  
UniRef50_Q10Z05 Cluster: Serine/threonine protein kinase; n=1; T...    30   8.9  

>UniRef50_A0DF61 Cluster: Chromosome undetermined scaffold_49, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_49,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 768

 Score = 35.1 bits (77), Expect = 0.31
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
 Frame = +2

Query: 77  VIGLLSGQLLG-WLPKELRFH*ELK-KSSNNSIQNGCSKDHLSESERRY 217
           ++ LL+G+    WLPK LR H +L   +SNNSIQ    +D  S+  +++
Sbjct: 350 LLNLLTGKKDNIWLPKFLRSHRQLDCLNSNNSIQQASKEDQFSQDAKKF 398


>UniRef50_Q8SSE8 Cluster: HEAT-SHOCK PROTEIN HSP90 HOMOLOG; n=2;
           cellular organisms|Rep: HEAT-SHOCK PROTEIN HSP90 HOMOLOG
           - Encephalitozoon cuniculi
          Length = 690

 Score = 33.5 bits (73), Expect = 0.96
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = +2

Query: 65  DFFFVIGLLSGQLLGWLPKELRFH*ELKKSSNNSIQNGC 181
           DF+ + GLLS +LL ++PK  RF    K   NN+I+  C
Sbjct: 313 DFWHIEGLLSIELLMFIPKRARFDMFNKNKKNNNIKLYC 351


>UniRef50_Q9URZ0 Cluster: Probable alpha-galactosidase precursor;
           n=5; Fungi|Rep: Probable alpha-galactosidase precursor -
           Schizosaccharomyces pombe (Fission yeast)
          Length = 436

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +1

Query: 148 EEFKQFYTKWLLKRSPVRVGATISEISP 231
           EE+K  +T W + +SP+ +G  +S +SP
Sbjct: 279 EEYKTHFTMWAILKSPLILGNDVSSMSP 306


>UniRef50_Q39KD4 Cluster: ResB-like/cytochrome c biosynthesis
           protein; n=40; Burkholderiales|Rep: ResB-like/cytochrome
           c biosynthesis protein - Burkholderia sp. (strain 383)
           (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
           R18194))
          Length = 738

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 166 YTKWLLKRSPVRVGATISEISP 231
           +  W+  +SPV   ATISEISP
Sbjct: 200 FQMWMFGKSPVNTSATISEISP 221


>UniRef50_Q2BC37 Cluster: Two-component sensor histidine kinase;
           n=1; Bacillus sp. NRRL B-14911|Rep: Two-component sensor
           histidine kinase - Bacillus sp. NRRL B-14911
          Length = 574

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 131 FH*ELKKSSNNSIQNGCSKDHLSESERRYRKSVQRF 238
           FH  +  +SNN +QNG  K  L++ E  Y + V  F
Sbjct: 52  FHYSIVTASNNVLQNGTVKRILTDEETEYEQMVSYF 87


>UniRef50_Q10Z05 Cluster: Serine/threonine protein kinase; n=1;
           Trichodesmium erythraeum IMS101|Rep: Serine/threonine
           protein kinase - Trichodesmium erythraeum (strain
           IMS101)
          Length = 509

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 15/56 (26%), Positives = 32/56 (57%)
 Frame = +2

Query: 53  IY*QDFFFVIGLLSGQLLGWLPKELRFH*ELKKSSNNSIQNGCSKDHLSESERRYR 220
           +Y Q   F + L +    GW+  ++      +K++NN+I +  +KD+L E+ ++Y+
Sbjct: 358 LYLQLIIFWLFLFTAGTFGWIGFDITLRYSYRKANNNNIAS-LTKDNLLENLKQYQ 412


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,481,638
Number of Sequences: 1657284
Number of extensions: 3115260
Number of successful extensions: 7785
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7785
length of database: 575,637,011
effective HSP length: 62
effective length of database: 472,885,403
effective search space used: 10403478866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)