SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P12
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   1.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   2.2  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   2.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   2.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   2.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   3.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   3.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   5.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   5.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 132 HSFRRYHSSCSISAILMMWYTIIWGSLNGRLRWMW*CN 19
           H+F  YH    ++ +  +W+  I  +  GR+  +W CN
Sbjct: 207 HTFGYYHILAMLNCLCSLWF--INCTAKGRVA-VWMCN 241


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 132 HSFRRYHSSCSISAILMMWYTIIWGSLNGRLRWMW*CN 19
           H+F  YH    ++ +  +W+  I  +  GR+  +W CN
Sbjct: 207 HTFGYYHILAMLNCLCSLWF--INCTAKGRVA-VWMCN 241


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -3

Query: 172 YCADECLSYLLKMSFVQKISFVV*YQCYLDDVVH 71
           +  DE LSY++  SF+    F++ +Q +    +H
Sbjct: 279 FLLDEKLSYIILTSFLNNFYFII-FQVFESFYLH 311


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +1

Query: 244 TDNSNNQRHTLSQQSTQNKLVDHAV----SQQHHQ 336
           T+N N+  H       Q+ +V+H V    S +HHQ
Sbjct: 317 TNNQNHHHHAGHHIHAQHHVVNHHVAANGSLKHHQ 351


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 274 LSQQSTQNKLVDHAVSQQHHQETTSESHIQ 363
           L Q    N  V  A++QQH +     +H+Q
Sbjct: 52  LVQAPKLNAEVKRAITQQHSERDERLAHVQ 81


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 163 DECLSYLLKMSFVQKISFVV 104
           DE +SY++ MSF   + F++
Sbjct: 284 DEEISYIVLMSFASDLLFIL 303


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 163 DECLSYLLKMSFVQKISFVV 104
           DE +SY++ MSF   + F++
Sbjct: 284 DEEISYIVLMSFASDLLFIL 303


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 163 DECLSYLLKMSFVQKISFVV 104
           DE +SY++ MSF   + F++
Sbjct: 284 DEEISYIVLMSFASDLLFIL 303


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 169 NISSDSLIQSEVNSTHDSRGSTHRHTDNS 255
           +++ D  + S VN         HR TDNS
Sbjct: 47  SVTKDQDVSSSVNRFRLRSRPGHRKTDNS 75


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -3

Query: 184 YPMRYCADECLSYLLKMSFVQKISFVV 104
           Y +    D  +SY++ +SF   + F++
Sbjct: 152 YQLSVLIDNNMSYIIIVSFATNLYFII 178


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 337 LGDVAETLHDQPIYSE*IAVIMCVFDCC 254
           LGD  E  +    Y     +I+ +FDCC
Sbjct: 230 LGDTVEIFNSLFGYQ----IILVIFDCC 253


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax
          protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 14 EGLHHHIHLN 43
          +GLHH  HLN
Sbjct: 37 QGLHHSPHLN 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.305    0.117    0.324 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,497
Number of Sequences: 336
Number of extensions: 1818
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (20.7 bits)

- SilkBase 1999-2023 -