Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P12
(438 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 28 0.55
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 0.55
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 28 0.72
SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr 2... 27 0.96
SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces pomb... 27 1.3
SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomy... 27 1.3
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 26 2.9
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 26 2.9
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 25 3.9
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 25 3.9
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 3.9
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 25 5.1
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 25 5.1
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 25 5.1
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 25 6.7
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 6.7
SPAC1786.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 6.7
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 24 8.9
SPBC1604.05 |pgi1||glucose-6-phosphate isomerase |Schizosaccharo... 24 8.9
SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15 |Schizo... 24 8.9
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 28.3 bits (60), Expect = 0.55
Identities = 15/60 (25%), Positives = 24/60 (40%)
Frame = +1
Query: 79 HHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSDSLIQSEVNSTHDSRGSTHRHTDNSN 258
HH +S + + S + ++ + + D L SE HDS + DNSN
Sbjct: 76 HHDNSKKESTNLDDSNMLEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSNKESTNLDNSN 135
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 0.55
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Frame = +1
Query: 25 SPHPSQPSIKGTPDDRVPHHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSDSLIQSEV 204
SP P+ S+ R + + R S+ H N +
Sbjct: 1264 SPSPTSSSMASAAPARTSVSRSKSKAERHETSTSSRKSSKSGEHHHHHNEGHADSSSTRT 1323
Query: 205 NSTH-DSRGSTHRHTDNSNNQ 264
+ H DSR S HRH S+++
Sbjct: 1324 SLAHQDSRKSLHRHLSRSSSR 1344
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 27.9 bits (59), Expect = 0.72
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 160 HQRNISSDSLIQSEVNS--THDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHH 333
HQ +S+ + Q E+NS T S+ ST +D+S+++ + S+ + S
Sbjct: 235 HQEFVSASIVQQPELNSLLTSQSKNSTPSESDSSSSESSSSVSDSSDLSSTSDSSSGDES 294
Query: 334 QETTSES 354
+T +S
Sbjct: 295 SDTARQS 301
>SPBC800.13 |||histone H4 variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 479
Score = 27.5 bits (58), Expect = 0.96
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +1
Query: 178 SDSLIQSEVNSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNK 300
S +L ++ V S +S S RHT +N+Q+ + + + NK
Sbjct: 79 SRALAKNPVPSPAESESSERRHTPQTNSQKSQKTPRLSSNK 119
>SPCC285.16c |msh6||MutS protein homolog|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1254
Score = 27.1 bits (57), Expect = 1.3
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = +1
Query: 178 SDSLIQSEVNSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSES 354
SDS + S +S HDS T DNS+N S S + +L S HH T +S
Sbjct: 40 SDSTLSS--SSNHDSNHDTPADVDNSSNVNKNSS--SPEREL---PTSPSHHANTEIDS 91
>SPBP35G2.06c |nup131|Nup133a|nucleoporin Nup131|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1142
Score = 27.1 bits (57), Expect = 1.3
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 164 SAISHRIVSFKVKSIQPTIHEEVLIVIQITATIKDTHYHSNLLRINW 304
S+ S R SFK + + E I + +KD Y LL++NW
Sbjct: 994 SSFSLRECSFKEVDLALELLERATITKDVYFYLKDLVYRRFLLQVNW 1040
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 25.8 bits (54), Expect = 2.9
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 230 VLIVIQITATIKDT-HYHSNLLRINWLIMQCLSNITKKQHLKATF 361
++++ Q + D H+ N + + L+M ++N+ K Q++ ATF
Sbjct: 168 IMVLFQPALLLIDHGHFQYNCVMLG-LVMYAIANLLKNQYVAATF 211
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 25.8 bits (54), Expect = 2.9
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 2/80 (2%)
Frame = +1
Query: 67 DRVPHHQDSTDTTR--RMISSERMXXXXXXXXXHQRNISSDSLIQSEVNSTHDSRGSTHR 240
D+ P H+ + + + H NI S+ + +S H S+ H
Sbjct: 293 DKKPSHKSNGRPNKLTAFFNKNSKASSISSAEEHPSNIDDSSIERRHYDSNHSSQIRDHP 352
Query: 241 HTDNSNNQRHTLSQQSTQNK 300
T+N+ + ++ S + +
Sbjct: 353 STNNNASSYQNFNETSDEGE 372
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 25.4 bits (53), Expect = 3.9
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3
Query: 403 NEFHSLLLSFRYFVECGFQMLFLGDVAETLHDQPI 299
NE H LL+ R + C F L L V E P+
Sbjct: 1016 NEIHGKLLTIRAVLSCFFSKLTLQQVQEFYEVVPL 1050
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 3.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 217 DSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQE 339
DS +H N +N+ +SQ + L +H SQQH Q+
Sbjct: 681 DSYDELEQHHANFHNKAG-ISQSNIPPHLQEHRQSQQHFQQ 720
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 184 SLIQSEVNSTHDSRGS-THRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSES 354
SL++S +N + + T DN N+R++ + S++ ++ETTS S
Sbjct: 171 SLVKSRLNQSRSNLPQMTREANDNDVNRRNSRGSSQGSISSFRNPDSRKQYEETTSAS 228
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.0 bits (52), Expect = 5.1
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 175 SSDSLIQSEVNSTHDSRGSTHRHTDNSNNQRHTLS 279
++ S ++ V S H + HR + +SN+Q H +S
Sbjct: 23 AATSRLEDLVESGHKPLPNMHRPSRDSNSQTHNIS 57
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 25.0 bits (52), Expect = 5.1
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = -1
Query: 120 RYHSSCSISAILMMWYT-----IIWGSLNGRLRWMW*CNPSVTS 4
++ ++CS A + +W T ++ L G RW+W C S S
Sbjct: 228 KHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADS 271
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 25.0 bits (52), Expect = 5.1
Identities = 18/102 (17%), Positives = 31/102 (30%)
Frame = +1
Query: 4 RGDRGITSPHPSQPSIKGTPDDRVPHHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSD 183
R D G PSQ SIK + R ++ D R + + +D
Sbjct: 31 RSDLGPAQELPSQESIKAAIEQRKSEIEEEEDIDPRYQDPDNEVALFATAPYDHEDEEAD 90
Query: 184 SLIQSEVNSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVD 309
+ QS R S + +++ ++ D
Sbjct: 91 KIYQSVEEHLSKRRKSQREKQEQLQKEKYEKENPKVSSQFAD 132
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 205 NSTHDSRGSTHRHTDNSNNQRHTLSQQSTQ 294
N+ + + G+ + + +NNQ+H S S Q
Sbjct: 565 NNNNSNSGNYNNNNSGNNNQQHQQSSSSLQ 594
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 24.6 bits (51), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
Frame = -3
Query: 175 RYCADECLSYL---LKMSFVQKISF 110
+YC D CLSYL L + + K+ F
Sbjct: 762 KYCMDACLSYLSGNLSVDEIWKLGF 786
>SPAC1786.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 296 INWLIMQCLSNITKKQHLKATFNEIPEGQ 382
+ WLI Q I + + L +T + +PEG+
Sbjct: 75 VPWLIRQKWHKIDEPRQLPSTHHALPEGR 103
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 302 WLIMQCLSNITKKQHLKATFNEIPEGQ*QRMELVQ 406
W I CLSN++ + HL + E + +E +Q
Sbjct: 615 WGIKHCLSNVSLQLHLHRFHELVSENLAKAVEYLQ 649
>SPBC1604.05 |pgi1||glucose-6-phosphate isomerase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 24.2 bits (50), Expect = 8.9
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 34 PSQPSIKGTPDDRVPH 81
P++ +GTPD+ VPH
Sbjct: 447 PAEVKAEGTPDEIVPH 462
>SPAC823.03 |ppk15||serine/threonine protein kinase Ppk15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 534
Score = 24.2 bits (50), Expect = 8.9
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 172 ISSDSLIQSEVNSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETT 345
+ SDS I N+ +R TH H+ +N+ RH S +T V A + +++ +
Sbjct: 1 MDSDSPILPLSNNPPAAR--THDHSQRNNHARHVSSSGTTLFAPVKPATKKYNYRRVS 56
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.305 0.117 0.324
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,723,793
Number of Sequences: 5004
Number of extensions: 31486
Number of successful extensions: 92
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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