Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P12
         (438 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.            32   1.00 
DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.          31   2.3  
AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.         31   2.3  
AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.          31   2.3  
AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprot...    30   4.0  

>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
          Length = 4061

 Score = 31.9 bits (69), Expect = 1.00
 Identities = 24/116 (20%), Positives = 44/116 (37%), Gaps = 3/116 (2%)
 Frame = +1

Query: 16   GITSPHPSQPSIKGTPDDRVPHHQDSTDTTRRMISSERMX---XXXXXXXXHQRNISSDS 186
            G +  H S  + +G  D    H Q  + +  R    ++             H+    +DS
Sbjct: 1189 GHSGSHHSHTTSQGRSD--ASHGQSGSRSASRQTRKDKQSGDGSRHSGSRHHEAASWADS 1246

Query: 187  LIQSEVNSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSES 354
               S+V     S   T RH  +S +Q     + S  ++ +  + S+ HH  +  +S
Sbjct: 1247 SRHSQVGQEQSSGSRTSRHQGSSVSQDSDSERHSDDSERLSGSASRNHHGSSREQS 1302


>DQ118293-1|AAZ99029.1| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 22/96 (22%), Positives = 33/96 (34%)
 Frame = +1

Query: 70   RVPHHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSDSLIQSEVNSTHDSRGSTHRHTD 249
            R+ H Q   DTTR   S              ++  S      SEV+S    R  +  HT 
Sbjct: 1541 RITHGQTG-DTTRHSYSGHEQTTQTGSRTTGRQRTSHSESTDSEVHSGGSHRPHSREHTY 1599

Query: 250  NSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESH 357
                 +H   + +   +   H  +     +TT  SH
Sbjct: 1600 GQAGSQHEEPEFTVHER---HGTTHGQIGDTTGHSH 1632


>AY827490-1|AAX12417.1| 2391|Homo sapiens ifapsoriasin protein.
          Length = 2391

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 22/96 (22%), Positives = 33/96 (34%)
 Frame = +1

Query: 70   RVPHHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSDSLIQSEVNSTHDSRGSTHRHTD 249
            R+ H Q   DTTR   S              ++  S      SEV+S    R  +  HT 
Sbjct: 1541 RITHGQTG-DTTRHSYSGHEQTTQTGSRTTGRQRTSHSESTDSEVHSGGSHRPHSREHTY 1599

Query: 250  NSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESH 357
                 +H   + +   +   H  +     +TT  SH
Sbjct: 1600 GQAGSQHEEPEFTVHER---HGTTHGQIGDTTGHSH 1632


>AL356504-2|CAC13173.2| 2391|Homo sapiens filaggrin 2 protein.
          Length = 2391

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 22/96 (22%), Positives = 33/96 (34%)
 Frame = +1

Query: 70   RVPHHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSDSLIQSEVNSTHDSRGSTHRHTD 249
            R+ H Q   DTTR   S              ++  S      SEV+S    R  +  HT 
Sbjct: 1541 RITHGQTG-DTTRHSYSGHEQTTQTGSRTTGRQRTSHSESTDSEVHSGGSHRPHSREHTY 1599

Query: 250  NSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESH 357
                 +H   + +   +   H  +     +TT  SH
Sbjct: 1600 GQAGSQHEEPEFTVHER---HGTTHGQIGDTTGHSH 1632


>AF163151-1|AAF42472.1| 1253|Homo sapiens dentin sialophosphoprotein
           precursor protein.
          Length = 1253

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 24/137 (17%), Positives = 42/137 (30%)
 Frame = +1

Query: 10  DRGITSPHPSQPSIKGTPDDRVPHHQDSTDTTRRMISSERMXXXXXXXXXHQRNISSDSL 189
           D   +  + S  S     D       DS+D++    SS+              +  SDS 
Sbjct: 568 DSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSS 627

Query: 190 IQSEVNSTHDSRGSTHRHTDNSNNQRHTLSQQSTQNKLVDHAVSQQHHQETTSESHIQXX 369
                +S  DS+  +     + ++     S  S  +   D + S      ++S       
Sbjct: 628 KSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSSSS 687

Query: 370 XXXXXXXXXXXSDNVNS 420
                      SD+ NS
Sbjct: 688 DSSNSSDSSDSSDSSNS 704


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.305    0.117    0.324 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,329,748
Number of Sequences: 237096
Number of extensions: 1060172
Number of successful extensions: 2058
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2043
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3545165828
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)