Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P11
         (268 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5E648 Cluster: Predicted protein; n=1; Lodderomyces el...    32   2.2  
UniRef50_A3HTU7 Cluster: Probable adenylate/guanylate cyclase pr...    32   2.9  
UniRef50_UPI000038D35E Cluster: hypothetical protein Npun0200466...    30   8.8  

>UniRef50_A5E648 Cluster: Predicted protein; n=1; Lodderomyces
           elongisporus NRRL YB-4239|Rep: Predicted protein -
           Lodderomyces elongisporus (Yeast) (Saccharomyces
           elongisporus)
          Length = 270

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +2

Query: 149 FYKTG*CNEWSRSLDDFEKYLKKVLVV---TPARTGERPLIYY 268
           +Y+T   N+W+ S+  F KYL  VL++    P +  E PL+ Y
Sbjct: 137 YYQT---NKWAHSIQSFNKYLFTVLIIISFVPLQHSEGPLVSY 176


>UniRef50_A3HTU7 Cluster: Probable adenylate/guanylate cyclase
           protein; n=1; Algoriphagus sp. PR1|Rep: Probable
           adenylate/guanylate cyclase protein - Algoriphagus sp.
           PR1
          Length = 732

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +2

Query: 119 INTSLHNLFFFYKT-G*CNEWSRSLDDFEKYLKKVLVVTP 235
           +  S+H+L F Y T G  + WS  ++  E+Y +K ++V P
Sbjct: 562 LKDSIHDLDFVYSTVGLISFWSGEIEKSEEYFEKAILVNP 601


>UniRef50_UPI000038D35E Cluster: hypothetical protein Npun02004668;
           n=1; Nostoc punctiforme PCC 73102|Rep: hypothetical
           protein Npun02004668 - Nostoc punctiforme PCC 73102
          Length = 965

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 252 RSPVRAGVTTRTFFKYFSKSSRLLDHSLHHP 160
           R PV   VT +  + +  KS RLL ++L+HP
Sbjct: 52  RLPVDYSVTGQALYNWLDKSDRLLANALNHP 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,797,584
Number of Sequences: 1657284
Number of extensions: 4146959
Number of successful extensions: 10037
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10036
length of database: 575,637,011
effective HSP length: 66
effective length of database: 466,256,267
effective search space used: 10257637874
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)