Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P08
(326 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 54 5e-09
SPAC139.05 |||succinate-semialdehyde dehydrogenase |Schizosaccha... 50 1e-07
SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|... 48 3e-07
SPAC1002.12c |||succinate-semialdehyde dehydrogenase |Schizosacc... 42 2e-05
SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces pombe... 42 3e-05
SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate dehydrogenase|Sch... 39 2e-04
SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces pomb... 35 0.003
SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase |Schiz... 29 0.24
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 27 0.54
SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase |Schizosacchar... 26 1.7
SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1 |Schizosa... 25 2.2
SPAC25G10.05c |his1||ATP phosphoribosyltransferase |Schizosaccha... 25 2.9
SPAC144.16 |||DUF59 family protein|Schizosaccharomyces pombe|chr... 25 3.8
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 25 3.8
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 24 5.1
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 24 6.7
SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces pomb... 24 6.7
SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16 |Schizosa... 24 6.7
SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces pomb... 23 8.8
SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate syntha... 23 8.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 23 8.8
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 54.0 bits (124), Expect = 5e-09
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Frame = +3
Query: 57 IINNRHFSRLQGLIDASKD---KIVMGG--RYDANDKFIEPTVVANVTAPDKIMEDEIFG 221
+++ F ++ I ++ + K V+GG R + FI PTV NV +KI +EIFG
Sbjct: 347 VVSKTQFEKIVSYIQSAINEGCKCVVGGLPRSEQKGYFIPPTVFTNVQTHNKIWREEIFG 406
Query: 222 PILPIVTIENAYEAIQFINDREHPLVLYMFS 314
P+L + T EA++ ND E+ L +FS
Sbjct: 407 PVLAVKTFHTNEEALELANDSEYGLGSGVFS 437
Score = 31.1 bits (67), Expect = 0.044
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 1 ARGKNLTPVTLELGGKSPV 57
A +N+ P+TLELGGKSP+
Sbjct: 260 AAAENIVPLTLELGGKSPL 278
>SPAC139.05 |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 493
Score = 49.6 bits (113), Expect = 1e-07
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 114 KIVMGGRYDANDK--FIEPTVVANVTAPDKIMEDEIFGPILPIVTIENAYEAIQFINDRE 287
KI +GG+ ++ K F EPTV++ VT + +E FGP+ + ++ E I++ ND +
Sbjct: 362 KITVGGKEISSSKGYFFEPTVLSGVTQDMLVASEETFGPLASVFKFDDTEEVIEWANDSD 421
Query: 288 HPLVLYMFSN 317
L Y+F+N
Sbjct: 422 VGLAGYVFTN 431
>SPAC9E9.09c |||aldehyde dehydrogenase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 503
Score = 48.4 bits (110), Expect = 3e-07
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Frame = +3
Query: 60 INNRHFSRLQGLID---ASKDKIVMGGRYDAN-DKFIEPTVVANVTAPDKIMEDEIFGPI 227
++ + + R+ I+ A K+ +GG+ N F+EPT+++NVT + ++EIFGP+
Sbjct: 347 VSKQQYERIVSYIESGIAHGAKLEIGGKRHGNLGYFVEPTILSNVTEDMAVGKEEIFGPV 406
Query: 228 LPIVTIENAYEAIQFINDREHPLVLYMFSN 317
L ++ + EAI+ N+ + L + +N
Sbjct: 407 LAVIKFKTIEEAIRRGNNSTYGLAAGVHTN 436
Score = 28.7 bits (61), Expect = 0.24
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1
Query: 1 ARGKNLTPVTLELGGKSP 54
A NL VTLELGGKSP
Sbjct: 259 AASSNLKKVTLELGGKSP 276
>SPAC1002.12c |||succinate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 41.9 bits (94), Expect = 2e-05
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Frame = +3
Query: 57 IINNRHFSRLQGLIDASKDK---IVMGGRYDAN--DKFIEPTVVANVTAPDKIMEDEIFG 221
+I+ + S+++ ++ + K +V GG+ +N + EPTV+ N I E+E FG
Sbjct: 345 LISEKAISKVKQHVEDAVQKGGVVVTGGKVASNLGPMYFEPTVIINAKQGMLISEEETFG 404
Query: 222 PILPIVTIENAYEAIQFINDREHPLVLYMFS 314
P+ + + E + + ND L Y+FS
Sbjct: 405 PVGALFKFDTEDEVVAWANDSPVGLAGYLFS 435
>SPAC922.07c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 41.5 bits (93), Expect = 3e-05
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +3
Query: 57 IINNRHFSRLQGLIDASKD---KIVMGGRYDANDK--FIEPTVVANVTAPDKIMEDEIFG 221
++N ++R++ I+ K K+V+G + FI PT+ A+ + I+++EIFG
Sbjct: 340 VVNKTQYNRIKNYIEQGKKEGAKLVLGDEPLPLKQGYFISPTIFADCSENMTIVKEEIFG 399
Query: 222 PILPIVTIENAYEAIQFINDREHPLVLYMFS 314
P++ I + EAI+ N+ + L F+
Sbjct: 400 PVVAISKFKTEDEAIEKANNTTYGLAAMCFT 430
Score = 25.4 bits (53), Expect = 2.2
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 13 NLTPVTLELGGKSP 54
NL VTLE GGKSP
Sbjct: 256 NLKAVTLECGGKSP 269
>SPBC24C6.04 |||delta-1-pyrroline-5-carboxylate
dehydrogenase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 38.7 bits (86), Expect = 2e-04
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Frame = +3
Query: 57 IINNRHFSRLQGLIDA----SKDKIVMGGRYDANDKF-IEPTVVANVTAPDKIMEDEIFG 221
+I+ F++L+ ++++ S+ +++ GG+ D ++ F +EPTV+ + I +E+FG
Sbjct: 376 VIHQASFNKLKKVLESAASDSEIEVLAGGKADDSEGFFVEPTVLLSKNPKHDIFVNELFG 435
Query: 222 PILPIVTIEN 251
P+L + E+
Sbjct: 436 PVLSVYVYED 445
>SPBC21C3.15c |||aldehyde dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 35.1 bits (77), Expect = 0.003
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Frame = +3
Query: 57 IINNRHFSRLQGLIDASKDK---IVMGG------RYDANDKFIEPTVVANVTAPDKIMED 209
+++N F L+ LI + K +V GG +Y + F+ PT++ + T KI ++
Sbjct: 315 MVSNNRFDHLESLIQDAVSKGARLVYGGHRFQHPKYPKGNYFL-PTLLVDATNEMKIAQE 373
Query: 210 EIFGPILPIVTIENAYEAIQFINDREHPLVLYMF 311
E F PI + ++ A++ N E L +F
Sbjct: 374 ECFAPIALVFRAKSPEHALEIANGTEFGLGASVF 407
Score = 27.9 bits (59), Expect = 0.41
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 10 KNLTPVTLELGGKSPVSL 63
K LTP+ LELGGK P L
Sbjct: 231 KQLTPLCLELGGKDPCIL 248
>SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 28.7 bits (61), Expect = 0.24
Identities = 23/78 (29%), Positives = 31/78 (39%)
Frame = +3
Query: 93 LIDASKDKIVMGGRYDANDKFIEPTVVANVTAPDKIMEDEIFGPILPIVTIENAYEAIQF 272
L ++ D + G R D TV+A +T DK D+ N E +
Sbjct: 83 LNESQADSLKAGDRVALLDPRDGQTVIAILTVEDKYTPDKA-----------NEAEKVFG 131
Query: 273 INDREHPLVLYMFSNQSN 326
NDR HP V Y+F N
Sbjct: 132 ANDRAHPAVDYLFGRAGN 149
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 27.5 bits (58), Expect = 0.54
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 117 IVMGGRYDANDKFIEPTVVANVTAPDKIMEDEI 215
IV G+ D K I+ T PD ++EDE+
Sbjct: 96 IVFSGKQDQKSKVIQCLRTERKTIPDDLVEDEV 128
>SPAC8F11.10c |pvg1|SPACUNK4.18|pyruvyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 25.8 bits (54), Expect = 1.7
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
Frame = -1
Query: 197 FVGGGHIGD----HCRLDELVVRIIPS 129
F GGG+ GD H L ELVVR PS
Sbjct: 155 FHGGGNFGDLYPDHQHLRELVVRDFPS 181
>SPAC17A5.02c |dbr1||RNA lariat debranching enzyme Dbr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 2.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -1
Query: 239 HYWKNRTKYFILHYFVGGGHIGDHCRLDEL 150
+Y+ R K IL FVGG H + LDEL
Sbjct: 75 NYYNGRNKAPILTIFVGGNHEASN-YLDEL 103
>SPAC25G10.05c |his1||ATP phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 310
Score = 25.0 bits (52), Expect = 2.9
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -1
Query: 176 GDHCRLDELVVRIIPSSHNDLIFARIDKSLETAKMPVINDTGLFPPSSKVTG 21
GD +D+LV R I +S L+ DK + AK D+G+ S V+G
Sbjct: 115 GDITSVDQLVGRRIVTSFEYLVAEYFDKVEKKAKSEGKVDSGIKTEISFVSG 166
>SPAC144.16 |||DUF59 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 179
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 246 ENAYEAIQFINDREHPLVLYMFS 314
+ Y+ + IND EHPL L S
Sbjct: 57 QEIYDLLAKINDPEHPLTLAQLS 79
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 24.6 bits (51), Expect = 3.8
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 158 DELVVRIIPSSHNDLIFARIDKSLE 84
D +++ +P+S D A IDKS++
Sbjct: 225 DSKIIKFLPNSQIDAQLASIDKSID 249
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 24.2 bits (50), Expect = 5.1
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = -1
Query: 173 DHCRLDELVVRIIPSSHNDLIFARIDKSLETAKMPVINDTGLFPPS 36
DH + + +SH +++ + + K+ V+ + G+ PPS
Sbjct: 290 DHTTNSFIALYYPDNSHGSFSIYKLNANAHSFKLNVVIEKGIIPPS 335
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = -1
Query: 320 LIAEHVKH*RVFPVIDELNSFVRVLNRHYWKNRTKYFI 207
L+ ++ + PV+ + F+ L W N ++FI
Sbjct: 108 LLNRYITRCALHPVLHQSPHFIAFLENPNWNNYVRFFI 145
>SPBC1E8.03c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 477
Score = 23.8 bits (49), Expect = 6.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 15 PDTGHFRARWKKSRIINNRHFSR 83
P+ RA W + R+ N HF++
Sbjct: 295 PNLSSIRANWPQHRLFINLHFNQ 317
>SPAC22F8.09 |rrp16|nop53|rRNA processing protein Rrp16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 419
Score = 23.8 bits (49), Expect = 6.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 45 KKSRIINNRHFSRLQGLIDASKD 113
KK +I + + +RLQ L+ +KD
Sbjct: 107 KKGKIFSRKELNRLQALVYKNKD 129
>SPAC23H3.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 300
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 269 LNSFVRVLNRHYWKNRTKYFIL 204
LN +LNRH N YFIL
Sbjct: 90 LNPITLILNRHEAGNEGIYFIL 111
>SPBC56F2.09c |arg5||arginine specific carbamoyl-phosphate synthase
Arg5 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 415
Score = 23.4 bits (48), Expect = 8.8
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +3
Query: 75 FSRLQGLIDASKDKIVMGGRYDAND--KFIEPTVV 173
F R QG +S KI +G YDAND FI P V
Sbjct: 172 FLREQG---SSLAKISIGEEYDANDDEAFINPEEV 203
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 23.4 bits (48), Expect = 8.8
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 95 KSLETAKMPVINDTGLFPPSS 33
K ++ +PV++DT F PS+
Sbjct: 322 KKVDRVNVPVVHDTTAFDPST 342
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,422,289
Number of Sequences: 5004
Number of extensions: 28828
Number of successful extensions: 110
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 89857768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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