Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P05
(275 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 157 3e-38
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 156 8e-38
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 150 7e-36
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 130 6e-30
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 119 1e-26
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 119 1e-26
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 115 2e-25
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 106 8e-23
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 103 8e-22
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 97 5e-20
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 93 1e-18
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 75 4e-13
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 60 7e-09
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 60 1e-08
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 58 4e-08
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 57 7e-08
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 38 0.043
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 37 0.076
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 37 0.10
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 36 0.13
UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyc... 36 0.18
UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1; ... 34 0.71
UniRef50_Q11FC7 Cluster: Transcriptional regulator, GntR family;... 32 2.2
UniRef50_Q6ZAY7 Cluster: Putative uncharacterized protein OJ1540... 32 2.2
UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoar... 32 2.9
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 32 2.9
UniRef50_Q6NZL8 Cluster: Signal peptide, CUB and EGF-like domain... 32 2.9
UniRef50_A5NU87 Cluster: Transcriptional regulator, Fis family p... 31 3.8
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 31 3.8
UniRef50_P17473 Cluster: Trans-acting transcriptional protein IC... 31 3.8
UniRef50_A1TZN4 Cluster: Flagellar hook-associated protein FlgK;... 31 5.0
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 31 5.0
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 31 5.0
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 31 5.0
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 31 5.0
UniRef50_Q4RQ03 Cluster: Chromosome 17 SCAF15006, whole genome s... 31 6.6
UniRef50_A5G223 Cluster: Putative uncharacterized protein; n=1; ... 31 6.6
UniRef50_A0LWP6 Cluster: Transcriptional regulator, MarR family;... 31 6.6
UniRef50_Q8IWX8 Cluster: Calcium homeostasis endoplasmic reticul... 31 6.6
UniRef50_UPI0000EBDDCB Cluster: PREDICTED: hypothetical protein;... 30 8.7
UniRef50_Q1D9J8 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_A7QIY4 Cluster: Chromosome chr2 scaffold_105, whole gen... 30 8.7
UniRef50_Q4PGL6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 30 8.7
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 157 bits (382), Expect = 3e-38
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 156 bits (379), Expect = 8e-38
Identities = 71/88 (80%), Positives = 79/88 (89%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
TN RVRLL+SKGHSCYRPRR GERKRKSVRGCIVD+ LSVL+LVIV+KG Q+IPGLTD
Sbjct: 69 TNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSLVIVKKGEQDIPGLTDNT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
+PRRLGPKR KIRK+FNL KEDDVR+Y
Sbjct: 129 IPRRLGPKRVGKIRKMFNLSKEDDVRQY 156
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 150 bits (363), Expect = 7e-36
Identities = 69/88 (78%), Positives = 78/88 (88%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
TN+RVRLL+ KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++IPGLTD
Sbjct: 69 TNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
V RRLGPKRAS IRKL+NL KEDDVR+Y
Sbjct: 129 VLRRLGPKRASNIRKLYNLTKEDDVRQY 156
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 130 bits (314), Expect = 6e-30
Identities = 60/88 (68%), Positives = 71/88 (80%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
TN+RVRLL KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD
Sbjct: 110 TNNRVRLLFKKGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKA 169
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
V ++LGPKRA+KIRKLFNL K DDVR+Y
Sbjct: 170 VGKKLGPKRATKIRKLFNLDKTDDVRKY 197
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 119 bits (287), Expect = 1e-26
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 198
RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD VPR
Sbjct: 72 RVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 131
Query: 199 RLGPKRASKIRKLFNLKKEDDV 264
RLGPKR +K+R+LF KK D V
Sbjct: 132 RLGPKRLTKLRRLFGFKKADGV 153
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 119 bits (286), Expect = 1e-26
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 198
RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD VPR
Sbjct: 77 RVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPR 136
Query: 199 RLGPKRASKIRKLFNLKKEDDV 264
RLGPKR +K+R+LF KK D V
Sbjct: 137 RLGPKRLTKLRRLFGFKKADRV 158
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 115 bits (277), Expect = 2e-25
Identities = 55/81 (67%), Positives = 65/81 (80%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 198
RVRLL+S+GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG EI GLT +PR
Sbjct: 72 RVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAEIDGLTTVTLPR 131
Query: 199 RLGPKRASKIRKLFNLKKEDD 261
+LGPKRA+ I+KLF LKKEDD
Sbjct: 132 KLGPKRANNIKKLFGLKKEDD 152
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 106 bits (255), Expect = 8e-23
Identities = 47/88 (53%), Positives = 68/88 (77%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
TN+RVRLL+ + CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+
Sbjct: 68 TNNRVRLLLDGRNGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDA 127
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
+P R GP+RAS RKLFNL ++DDV+++
Sbjct: 128 LPMRAGPQRASHFRKLFNLSQKDDVKKF 155
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 103 bits (247), Expect = 8e-22
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T R+RLL+ G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +EI GLT
Sbjct: 69 TPRRIRLLLKTGASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTA 128
Query: 190 VPRRLGPKRASKIRKLFNL 246
VPRR GPKRAS +R +F +
Sbjct: 129 VPRRFGPKRASTLRAMFGI 147
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 97.5 bits (232), Expect = 5e-20
Identities = 46/78 (58%), Positives = 59/78 (75%)
Frame = +1
Query: 13 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEV 192
+ R RLL+ +G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD V
Sbjct: 76 SQRARLLLRQGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVV 135
Query: 193 PRRLGPKRASKIRKLFNL 246
P+RL PKRASKIR+LF L
Sbjct: 136 PKRLVPKRASKIRRLFGL 153
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 93.1 bits (221), Expect = 1e-18
Identities = 45/89 (50%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Frame = +1
Query: 13 NSRVRLLMSKGHSCYRPRR--DGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDG 186
+SRV LL+ +G + R GER+RK+VRGC++ ++++++ + I + G Q I G+TD
Sbjct: 71 SSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDT 130
Query: 187 EVPRRLGPKRASKIRKLFNLKKEDDVRRY 273
PRRLGPKRASKIRKLFNL + +DVR+Y
Sbjct: 131 TAPRRLGPKRASKIRKLFNLSRTEDVRKY 159
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 74.5 bits (175), Expect = 4e-13
Identities = 39/83 (46%), Positives = 53/83 (63%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T RVR L+SKG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+
Sbjct: 54 TKKRVRPLLSKGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAV 113
Query: 190 VPRRLGPKRASKIRKLFNLKKED 258
P++ K+RK+F + E+
Sbjct: 114 NDVSHLPRKEKKLRKMFGVPDEE 136
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 60.5 bits (140), Expect = 7e-09
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K
Sbjct: 69 THGRLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS--------- 118
Query: 190 VPRRLGPKRASKIRKLFNLKKEDD 261
P RLGP R+S I K++ L +EDD
Sbjct: 119 -PCRLGPVRSSNISKIYYLCEEDD 141
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 59.7 bits (138), Expect = 1e-08
Identities = 34/88 (38%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +1
Query: 16 SRVRLLMSKGHSCYR--PRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
SRV++L+ KG + R + GER RKSVRGCIV +SVL + ++ ++ +T+
Sbjct: 71 SRVKILLKKGSTGCRGYKMKKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKN 129
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
+ L KR+S +RK+ L K DD+R++
Sbjct: 130 SEKTLTHKRSSNLRKVLCLTKTDDIRKH 157
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 58.0 bits (134), Expect = 4e-08
Identities = 36/81 (44%), Positives = 49/81 (60%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPR 198
R+RLL K HSC+ PR + RK K+VR V+AN+S L LV+++K P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PC 67
Query: 199 RLGPKRASKIRKLFNLKKEDD 261
RLGP R+S I K++ L +EDD
Sbjct: 68 RLGPVRSSNISKIYYLCEEDD 88
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 57.2 bits (132), Expect = 7e-08
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1
Query: 160 QEIPGLTDGEVPRRLGPKRASKIRKLFNLKKEDD 261
++IPGLTD PR +GPKRAS+IRKLFNL KEDD
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDD 113
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 37.9 bits (84), Expect = 0.043
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 16 SRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 156
+R RLL+S G +RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 71 ARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 37.1 bits (82), Expect = 0.076
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 RVRLLMSKGHS-CYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVP 195
RV LL++ HS Y+P R E S++ V +S+L +VI+ G ++IPG T P
Sbjct: 61 RVHLLLNNLHSYIYKPLRTREMNYTSLQDA-VKLPISLLNMVIIINGRKDIPGQTKRWAP 119
Query: 196 RR 201
+R
Sbjct: 120 KR 121
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 36.7 bits (81), Expect = 0.10
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 147
RV++L+S+G +RPR GER++K+V G + N+ + + IV
Sbjct: 83 RVKILLSRGPG-FRPRERGERRKKTVHGNTISPNIVQVNMKIV 124
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 36.3 bits (80), Expect = 0.13
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRG 102
RVR+L+SKG +RP+ GER++K+VRG
Sbjct: 83 RVRVLLSKGPG-FRPKEKGERRKKTVRG 109
>UniRef50_A6C4P7 Cluster: Pseudouridine synthase; n=1; Planctomyces
maris DSM 8797|Rep: Pseudouridine synthase -
Planctomyces maris DSM 8797
Length = 352
Score = 35.9 bits (79), Expect = 0.18
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +1
Query: 16 SRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVP 195
S ++ L +G S + E + + +R + V+ LV +R G + L GE
Sbjct: 184 SGLKYLKKQGKSAFLELTLHEGQNREIRRMMARIGHKVIQLVRIRFGPLNLGKLKTGE-S 242
Query: 196 RRLGPKRASKIRKLFNLKKEDDVR 267
RRL K+R+L N K D+R
Sbjct: 243 RRLSDTELKKLRQLLNEKHSPDIR 266
>UniRef50_Q2H164 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 744
Score = 33.9 bits (74), Expect = 0.71
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = -1
Query: 209 GPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRRGL*QEWP 42
GP RRG +P +SP S P R+ R R+ ++ QP + +PS+ G Q +P
Sbjct: 369 GPARRGQTPPISPPPSETPTRSAPREAMGRILTSSQPPAATQ--TPSQTG--QRYP 420
>UniRef50_Q11FC7 Cluster: Transcriptional regulator, GntR family;
n=1; Mesorhizobium sp. BNC1|Rep: Transcriptional
regulator, GntR family - Mesorhizobium sp. (strain BNC1)
Length = 234
Score = 32.3 bits (70), Expect = 2.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = -1
Query: 260 SSSFFKLNNFRILDARLGPRRRGTSPSVSP--GISCAPLRTMTRAKTERLASTMQPRTDL 87
S S F+ + I+ L P + + P ++ G+S PLR R ER T PR +
Sbjct: 19 SDSLFEKLSEAIVRGELPPGTKLSEPKLAARHGVSRGPLREAIRRLEERKLVTRTPRQGV 78
Query: 86 RFLSPSRR 63
R + PS +
Sbjct: 79 RVIVPSHK 86
>UniRef50_Q6ZAY7 Cluster: Putative uncharacterized protein
OJ1540_G08.6; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1540_G08.6 - Oryza sativa subsp. japonica (Rice)
Length = 240
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -1
Query: 215 RLGPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRR 63
R GPRRR T+P+ C P +++ R + A+ P SP+RR
Sbjct: 166 RHGPRRRSTAPARRLRPPCRPTQSLARLRCGAAAAATIPTRGAAPASPARR 216
>UniRef50_A0N0V6 Cluster: Putative regulatory protein; n=2; Azoarcus
anaerobius|Rep: Putative regulatory protein - Azoarcus
anaerobius
Length = 661
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 31 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGP 210
++ GH YR R +R+ D ++ + L ++R +E G D V R+LG
Sbjct: 582 IIKPGHLAYRMRDRRTPERQHAAASSRDQSIPAIQLDLIRSAIEEFNGNVD-LVGRKLGL 640
Query: 211 KRASKIRKL 237
RA+ R++
Sbjct: 641 SRATVYRRM 649
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 25 RLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIV 147
R+L+S G + PR GER+RK+VRG + ++ + VIV
Sbjct: 173 RVLLS-GPPGFHPREKGERRRKTVRGNTITHDIVQINTVIV 212
>UniRef50_Q6NZL8 Cluster: Signal peptide, CUB and EGF-like
domain-containing protein 1 precursor; n=10;
Tetrapoda|Rep: Signal peptide, CUB and EGF-like
domain-containing protein 1 precursor - Mus musculus
(Mouse)
Length = 1018
Score = 31.9 bits (69), Expect = 2.9
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 224 LDARLGPRRRGTSPSVSPGISCA---PLRTMTRAKTERLASTMQPRTDLR 84
L + P+R GTS S PG S A P+R R K +QPR+ R
Sbjct: 487 LQGKTLPKRNGTSSSTGPGCSDAPTTPIRQKARFKIRDAKCHLQPRSQER 536
>UniRef50_A5NU87 Cluster: Transcriptional regulator, Fis family
precursor; n=1; Methylobacterium sp. 4-46|Rep:
Transcriptional regulator, Fis family precursor -
Methylobacterium sp. 4-46
Length = 782
Score = 31.5 bits (68), Expect = 3.8
Identities = 30/96 (31%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Frame = -1
Query: 245 KLNNFRILD-ARLGPRRRGTSPS------VSPGISCAPLRTMTRAKTERLASTMQPRTDL 87
K +RIL AR RRRG++ PG+SC PL + + + RT
Sbjct: 68 KSRKYRILPRARAIGRRRGSAACGGARWRAGPGLSCRPLARRIGPRRPARPAGLHARTSA 127
Query: 86 RFLSPSRRGL*QE--------WPFDIKRRTRLLVPR 3
R + RRG +E P D RR R PR
Sbjct: 128 RTSARERRGRARERSDERTSFRPIDFARRVRSAFPR 163
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 25 RLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVR 150
R ++ G + P +GER+RK++RG + + + +IVR
Sbjct: 173 RKILLSGPPGFYPNENGERRRKTIRGNTISQEIVQINTIIVR 214
>UniRef50_P17473 Cluster: Trans-acting transcriptional protein ICP4;
n=11; Varicellovirus|Rep: Trans-acting transcriptional
protein ICP4 - Equine herpesvirus 1 (strain Kentucky A)
(EHV-1) (Equine abortionvirus)
Length = 1487
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 61 PRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRA 219
PR R R+ C++ AL+ +R GA +PGL E+P P A
Sbjct: 651 PRPSAFRLRELGDACVLACQAVFEALLRLRGGASAVPGLDPSEIPSPACPPEA 703
>UniRef50_A1TZN4 Cluster: Flagellar hook-associated protein FlgK;
n=2; Marinobacter|Rep: Flagellar hook-associated protein
FlgK - Marinobacter aquaeolei (strain ATCC 700491 / DSM
11845 / VT8)(Marinobacter hydrocarbonoclasticus (strain
DSM 11845))
Length = 688
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 106 IVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNL 246
+ DAN + ++ + E PGL G P L KR K+R+L L
Sbjct: 166 VKDANTLLKSIAELNLAISESPGLAQGREPLELMDKRDEKLRQLSEL 212
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 85 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRASKIRKLFNLKKE 255
+KS + C N ++ LV++RKG + LT G + K S RK+ N+ K+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKD 283
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 31.1 bits (67), Expect = 5.0
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -3
Query: 219 RTLGT*TAGNFTVSQSRNFLCTFADNDQG*D*KVSINNATTNRL--AFPLTVTTWSVARV 46
RTL T +F + ++R+ DNDQ V ++ATT RL AF L + A
Sbjct: 114 RTLRTTETRHFGIGEARDVGVALLDNDQVQHGNVLGDDATTARLASAFTLASAVAAEAAR 173
Query: 45 AF*HQETYTAV 13
A H++ +T V
Sbjct: 174 ALGHEQEHTLV 184
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/52 (26%), Positives = 31/52 (59%)
Frame = +1
Query: 19 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPG 174
++R+L+ +G Y + G R+RKS+RG + +++++ +V G+ + G
Sbjct: 68 KMRVLLKEGPG-YNVKEKGLRRRKSLRGNTISKDITLINTKVVEYGSAPLGG 118
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 31 LMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGL--TDGE 189
++ +G + + P DGERKR +VRG V ++ L + I G + + L DG+
Sbjct: 75 VLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHGEEPVAELLGADGD 129
>UniRef50_Q4RQ03 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1364
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -2
Query: 154 LCGQ*PGLRLKG*HQQCNHEQTCVSS--HRHDVVCSK--SGLLTSRDVHGC 14
LCG P L G HQ C + TC+++ ++ C++ SG R H C
Sbjct: 363 LCGTLPDLNYCGTHQPCLNGGTCINTGPDKYQCTCAEGYSGANCERAEHAC 413
>UniRef50_A5G223 Cluster: Putative uncharacterized protein; n=1;
Acidiphilium cryptum JF-5|Rep: Putative uncharacterized
protein - Acidiphilium cryptum (strain JF-5)
Length = 132
Score = 30.7 bits (66), Expect = 6.6
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = -1
Query: 263 TSSSFFKLNNFRILDARLGPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLR 84
T + F + ++D LG +SP + +P ++ R + + L Q LR
Sbjct: 23 TMNELFAIIEAELVD--LGAYAERMQEVLSPALVASPESSLCRQEAQMLDILTQRLQGLR 80
Query: 83 -FLSPSRRGL*QEWPFDIKRRTRLLV 9
F+ RRGL + W D R R +V
Sbjct: 81 TFMEHLRRGLPETWLVDPSRAARAVV 106
>UniRef50_A0LWP6 Cluster: Transcriptional regulator, MarR family;
n=1; Acidothermus cellulolyticus 11B|Rep:
Transcriptional regulator, MarR family - Acidothermus
cellulolyticus (strain ATCC 43068 / 11B)
Length = 155
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 112 DANLSVLALVIVRKGAQEIPGLTDGEVP--RRLGPKRASKIRKLFNLKKE 255
D + V+ + + R+GAQ + GLT V RRL P A ++L +++E
Sbjct: 90 DRDARVVRVTLTRRGAQRLTGLTSQHVAEIRRLAPAFARLTKELAAMQEE 139
>UniRef50_Q8IWX8 Cluster: Calcium homeostasis endoplasmic reticulum
protein; n=43; Euteleostomi|Rep: Calcium homeostasis
endoplasmic reticulum protein - Homo sapiens (Human)
Length = 916
Score = 30.7 bits (66), Expect = 6.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 209 GPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRR 63
G R S S S SC+ R+ +R+++ R S Q R+ + SP RR
Sbjct: 762 GSYSRSRSRSCSRSSSCSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRR 810
>UniRef50_UPI0000EBDDCB Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 216
Score = 30.3 bits (65), Expect = 8.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = -1
Query: 209 GPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRR 63
GPRRR P + + T A++ R A+ QPR P+RR
Sbjct: 114 GPRRRPVGPQAAAAAAATAGATAAPAESRRAAARPQPREAQSRAPPARR 162
>UniRef50_Q1D9J8 Cluster: Putative uncharacterized protein; n=1;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 206
Score = 30.3 bits (65), Expect = 8.7
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = -1
Query: 227 ILDARLGPRRRGTSPSVSPGISCAPLRTMTRAKTER 120
+L AR PRR SPS++P + PLR+ TRA R
Sbjct: 2 LLRAR-APRRAAHSPSLAPRKAKPPLRSETRAAASR 36
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 30.3 bits (65), Expect = 8.7
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = +1
Query: 43 GHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRRLGPKRAS 222
GH+ R R R R+ GC +DA L + A P RR+GP RA
Sbjct: 77 GHAEQRRGRHRRRYRREHAGCGIDAERRERRLTDASRRAVRAPLRRPVGARRRVGPCRAR 136
Query: 223 KIRKL 237
+++ L
Sbjct: 137 RMKDL 141
>UniRef50_A7QIY4 Cluster: Chromosome chr2 scaffold_105, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_105, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 228
Score = 30.3 bits (65), Expect = 8.7
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 121 LSVLALVIVRKGAQEIPGLTDGEVPR 198
L VL LVIV+KG ++ LTD E PR
Sbjct: 52 LFVLNLVIVKKGENDLSRLTDTEKPR 77
>UniRef50_Q4PGL6 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 712
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 218 ARLGPRRRGTSPSVSPGISCAP 153
A+L P+ RGTSPS+SP S P
Sbjct: 55 AQLSPKIRGTSPSLSPNFSPKP 76
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 13 NSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 111
+ R ++L++ G + PR GER+RKSVRG ++
Sbjct: 178 SGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 264,706,472
Number of Sequences: 1657284
Number of extensions: 4563038
Number of successful extensions: 12790
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 12535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12785
length of database: 575,637,011
effective HSP length: 69
effective length of database: 461,284,415
effective search space used: 10148257130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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