Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P05
         (275 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   2.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    20   4.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   4.2  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           20   5.5  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   5.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    19   7.3  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    19   7.3  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    19   7.3  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    19   7.3  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 83  NASLFVVALLMLTFQ 127
           NASLF+  L+ L+F+
Sbjct: 142 NASLFIFDLIFLSFR 156


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 203 RRRGTSPSVSPGISCAPLRTMTR 135
           +R+ TSP +SP  S  P    T+
Sbjct: 471 KRQRTSPQLSPMSSLPPYPNRTQ 493



 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 37  SKGHSCYR 60
           SKG SCYR
Sbjct: 310 SKGSSCYR 317


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 4.2
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 163 EIPGLTDGEVPRRLGPKRASK 225
           E+P L  G VPR+  P ++++
Sbjct: 817 EVPMLLHGVVPRKEIPAKSAE 837


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 157 AQEIPGLTDGE 189
           AQEIPG   GE
Sbjct: 298 AQEIPGQNPGE 308


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 44  ATLATDHVVTVRGNASLFV 100
           ATLA   +VTV GN+++ +
Sbjct: 40  ATLAIIFLVTVIGNSTVLL 58


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 78  EETQVCSWLHC 110
           E   VC+WL C
Sbjct: 342 ERPFVCNWLFC 352


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 266 RTSSSFFKLNNFRILDARLGPRR 198
           R +S F  L  FR+L+ +LG R+
Sbjct: 68  RPASGFQSLQ-FRLLENKLGVRQ 89


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 266 RTSSSFFKLNNFRILDARLGPRR 198
           R +S F  L  FR+L+ +LG R+
Sbjct: 128 RPASGFQSLQ-FRLLENKLGVRQ 149


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 266 RTSSSFFKLNNFRILDARLGPRR 198
           R +S F  L  FR+L+ +LG R+
Sbjct: 128 RPASGFQSLQ-FRLLENKLGVRQ 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,561
Number of Sequences: 336
Number of extensions: 1078
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4577651
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)