Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P05
(275 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 157 4e-39
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 157 4e-39
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 157 4e-39
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 157 4e-39
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 157 4e-39
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 155 2e-38
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 154 4e-38
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 131 4e-31
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 31 0.86
AK098038-1|BAC05219.1| 183|Homo sapiens protein ( Homo sapiens ... 28 6.1
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 67 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 126
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 127 VPRRLGPKRASRIRKLFNLSKEDDVRQY 154
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 38 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 97
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 98 VPRRLGPKRASRIRKLFNLSKEDDVRQY 125
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 157 bits (382), Expect = 4e-39
Identities = 74/88 (84%), Positives = 81/88 (92%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRKLFNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVRQY 156
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 155 bits (376), Expect = 2e-38
Identities = 73/88 (82%), Positives = 80/88 (90%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVRRY 273
VPRRLGPKRAS+IRK FNL KEDDVR+Y
Sbjct: 129 VPRRLGPKRASRIRKRFNLSKEDDVRQY 156
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 154 bits (374), Expect = 4e-38
Identities = 73/86 (84%), Positives = 79/86 (91%)
Frame = +1
Query: 10 TNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGE 189
T+ RVRLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD
Sbjct: 69 THGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTT 128
Query: 190 VPRRLGPKRASKIRKLFNLKKEDDVR 267
VPRRLGPKRAS+IRKLFNL KEDDVR
Sbjct: 129 VPRRLGPKRASRIRKLFNLSKEDDVR 154
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 131 bits (316), Expect = 4e-31
Identities = 61/73 (83%), Positives = 67/73 (91%)
Frame = +1
Query: 22 VRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGEVPRR 201
+RLL+SKGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++IPGLTD VPRR
Sbjct: 2 IRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRR 61
Query: 202 LGPKRASKIRKLF 240
LGPK AS+IRKLF
Sbjct: 62 LGPKEASRIRKLF 74
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -1
Query: 209 GPRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSRR 63
G R S S S SC+ R+ +R+++ R S Q R+ + SP RR
Sbjct: 762 GSYSRSRSRSCSRSSSCSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRR 810
>AK098038-1|BAC05219.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ40719 fis, clone THYMU2028379. ).
Length = 183
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Frame = -1
Query: 218 ARLG-PRRRGTSPSVSPGISCAPLRTMTRAKTERLASTMQPRTDLRFLSPSR 66
AR G P R SP SP +C P R + + PR DLR +R
Sbjct: 22 ARAGTPTRPARSPLRSPRTACLPARVARLGMAMKPRAWPGPRADLRATRSAR 73
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,443,561
Number of Sequences: 237096
Number of extensions: 711871
Number of successful extensions: 1698
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1698
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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