Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P04
         (370 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       24   0.57 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    20   7.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   7.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   9.2  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    20   9.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    20   9.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    20   9.2  

>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.8 bits (49), Expect = 0.57
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 242 VHQTAIIRNNPRKAVRS 292
           +HQT I  NNPR   R+
Sbjct: 46  IHQTVIYHNNPRDPNRA 62


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -3

Query: 290 NAQPCEGCFGLSQFDVQTHLLWCHSY 213
           NA  CEGC G  +  +  + ++   Y
Sbjct: 201 NALTCEGCKGFFRRSITKNAVYQCKY 226


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 191 KSGYGFINRNDTKEDVFVHQTAIIRNNP 274
           K+ +  +N N+ +  +      IIR+NP
Sbjct: 584 KAAFAHLNSNEARATLNWVSKLIIRSNP 611


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 5/14 (35%), Positives = 8/14 (57%)
 Frame = +1

Query: 232 RCVCTSNCDNPKQP 273
           +C C   C + K+P
Sbjct: 189 KCCCLRTCSSAKRP 202


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 163 FGYCQMVQRQEW 198
           FGY Q V+ ++W
Sbjct: 172 FGYKQCVENRKW 183


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 163 FGYCQMVQRQEW 198
           FGY Q V+ ++W
Sbjct: 405 FGYKQCVENRKW 416


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 163 FGYCQMVQRQEW 198
           FGY Q V+ ++W
Sbjct: 405 FGYKQCVENRKW 416


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,054
Number of Sequences: 336
Number of extensions: 998
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)