Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P04
(370 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 132 3e-31
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 132 3e-31
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 132 3e-31
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 132 3e-31
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 132 3e-31
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 132 3e-31
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 132 3e-31
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 132 3e-31
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 132 3e-31
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 131 6e-31
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 131 6e-31
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 131 6e-31
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 131 6e-31
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 131 6e-31
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 131 6e-31
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 131 6e-31
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 131 6e-31
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 131 6e-31
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 130 1e-30
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 128 4e-30
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 128 4e-30
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 128 4e-30
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 124 7e-29
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 69 5e-12
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 58 1e-08
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 58 1e-08
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 58 1e-08
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 58 1e-08
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 58 1e-08
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 58 1e-08
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 58 1e-08
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 58 1e-08
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 58 1e-08
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 57 2e-08
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 57 2e-08
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 57 2e-08
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 57 2e-08
CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein. 31 1.5
BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein. 31 1.5
AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial acon... 31 1.5
AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIP... 31 1.5
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 53 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 112
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 113 VEGEKGAEAANVTGP 127
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 51 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 110
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 111 VEGEKGAEAANVTGP 125
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 94 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 153
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 154 VEGEKGAEAANVTGP 168
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGEEAANVTGP 128
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 132 bits (319), Expect = 3e-31
Identities = 62/75 (82%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 54 VIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 113
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 114 VEGEKGAEAANVTGP 128
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 156 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 215
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 216 VEGEKGAEAANVTGP 230
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 131 bits (317), Expect = 6e-31
Identities = 61/75 (81%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF V
Sbjct: 19 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDV 78
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 79 VEGEKGAEAANVTGP 93
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 130 bits (314), Expect = 1e-30
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A KV GTVKWFNV++GYGFINRNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF V
Sbjct: 86 VLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDV 145
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EAA VTGP
Sbjct: 146 VEGEKGAEAANVTGP 160
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 128 bits (310), Expect = 4e-30
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EA VTGP
Sbjct: 149 VEGEKGAEATNVTGP 163
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 128 bits (310), Expect = 4e-30
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EA VTGP
Sbjct: 149 VEGEKGAEATNVTGP 163
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 128 bits (310), Expect = 4e-30
Identities = 60/75 (80%), Positives = 65/75 (86%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
V+A +V GTVKWFNV++GYGFINRNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF V
Sbjct: 89 VLAIQVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDV 148
Query: 326 VAGEKGYEAARVTGP 370
V GEKG EA VTGP
Sbjct: 149 VEGEKGAEATNVTGP 163
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 124 bits (300), Expect = 7e-29
Identities = 58/75 (77%), Positives = 64/75 (85%)
Frame = +2
Query: 146 VIAEKVSGTVKWFNVKSGYGFINRNDTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFAV 325
VIA KV GTVKWFNV++GYGFI+RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF V
Sbjct: 50 VIATKVLGTVKWFNVRNGYGFIHRNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDV 109
Query: 326 VAGEKGYEAARVTGP 370
V GEKG +AA VTGP
Sbjct: 110 VEGEKGAKAANVTGP 124
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 68.9 bits (161), Expect = 5e-12
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +2
Query: 236 VFVHQTAIIRNNPRKAVRSVGDGEAVEFAVVAGEKGYEAARVTGP 370
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG EA VTGP
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGP 67
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 87 FKKSSKGLESIRVTGP 102
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 87 FKKSSKGLESIRVTGP 102
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 64 FKKSSKGLESIRVTGP 79
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 64 FKKSSKGLESIRVTGP 79
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 64 FKKSSKGLESIRVTGP 79
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 64 FKKSSKGLESIRVTGP 79
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 8 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 63
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 64 FKKSSKGLESIRVTGP 79
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 87 FKKSSKGLESIRVTGP 102
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFI---NRN----DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GFI NR D DVFVHQ+ + + RS+ +GE VEF
Sbjct: 31 TGHCKWFNVRMGFGFISMINREGSPLDIPVDVFVHQSKLFM----EGFRSLKEGEPVEFT 86
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 87 FKKSSKGLESIRVTGP 102
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 97 FKKSAKGLESIRVTGP 112
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 97 FKKSAKGLESIRVTGP 112
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 97 FKKSAKGLESIRVTGP 112
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 57.2 bits (132), Expect = 2e-08
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Frame = +2
Query: 164 SGTVKWFNVKSGYGFINRN-------DTKEDVFVHQTAIIRNNPRKAVRSVGDGEAVEFA 322
+G KWFNV+ G+GF++ D DVFVHQ+ + + RS+ +GEAVEF
Sbjct: 41 AGICKWFNVRMGFGFLSMTARAGVALDPPVDVFVHQSKL----HMEGFRSLKEGEAVEFT 96
Query: 323 VVAGEKGYEAARVTGP 370
KG E+ RVTGP
Sbjct: 97 FKKSAKGLESIRVTGP 112
>CR456457-1|CAG30343.1| 153|Homo sapiens dJ347H13.2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 259
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>BC067113-1|AAH67113.1| 153|Homo sapiens CSDC2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 259
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AL023553-5|CAB46024.1| 153|Homo sapiens protein ( hondrial
aconitase 2, the gene Statin S).).
Length = 153
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 259
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
>AB027011-1|BAA84704.1| 153|Homo sapiens RNA-binding protein PIPPin
protein.
Length = 153
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 167 GTVKWFNVKSGYGFINRNDTKEDVFVHQTAI 259
G K F+ G+GFI + ED+FVH + I
Sbjct: 71 GVCKQFSRSQGHGFITPENGSEDIFVHVSDI 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,507,376
Number of Sequences: 237096
Number of extensions: 601066
Number of successful extensions: 1363
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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