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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P03
         (154 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   0.21 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   0.37 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   0.37 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   0.64 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   0.64 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   0.64 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   0.64 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   1.5  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    20   2.0  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    20   2.0  
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...    20   2.0  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    20   2.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   2.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    19   3.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    19   4.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    19   4.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    19   4.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    19   6.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    19   6.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    19   6.0  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    19   6.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    18   7.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    18   7.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 0.21
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -3

Query: 110 GEDADVKIQDFDDVPEDEDG**LNVIFHKKKKKK 9
           GED D      +DV EDED    +     KKKKK
Sbjct: 237 GEDKDKDKPKIEDVGEDEDE---DTKKEDKKKKK 267


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 0.37
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 45  LSTVFILWDIIEILYFDVGIFAVLYDIVYGQQY 143
           + T+F +  +++I    VGIF  LY  ++G  Y
Sbjct: 234 IQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIY 266


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 0.37
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 45  LSTVFILWDIIEILYFDVGIFAVLYDIVYGQQY 143
           + T+F +  +++I    VGIF  LY  ++G  Y
Sbjct: 59  IQTIFSVPLLMKIASQFVGIFCSLYFCIFGYIY 91


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 0.64
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           ++ADVK +D D++ +++
Sbjct: 518 DEADVKTEDLDEIQKEK 534



 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 48  STVFILWDIIE 80
           +T F++W IIE
Sbjct: 238 ATGFVVWPIIE 248


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 0.64
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           ++ADVK +D D++ +++
Sbjct: 518 DEADVKTEDLDEIQKEK 534



 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 48  STVFILWDIIE 80
           +T F++W IIE
Sbjct: 238 ATGFVVWPIIE 248


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 0.64
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           ++ADVK +D D++ +++
Sbjct: 518 DEADVKTEDLDEIQKEK 534



 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 48  STVFILWDIIE 80
           +T F++W IIE
Sbjct: 238 ATGFVVWPIIE 248


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 0.64
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           ++ADVK +D D++ +++
Sbjct: 518 DEADVKTEDLDEIQKEK 534



 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 48  STVFILWDIIE 80
           +T F++W IIE
Sbjct: 238 ATGFVVWPIIE 248


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 1.5
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = +3

Query: 72  IIEILYFDVGIFAVLYDIVY 131
           I+ IL+F  G+ + ++++VY
Sbjct: 140 IVFILFFAQGLTSPIFNLVY 159


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 24  ENVKAKIQDKEGIPPDQ 40


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 24  ENVKAKIQDKEGIPPDQ 40



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 100 ENVKAKIQDKEGIPPDQ 116



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 176 ENVKAKIQDKEGIPPDQ 192



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 252 ENVKAKIQDKEGIPPDQ 268



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 328 ENVKAKIQDKEGIPPDQ 344



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 404 ENVKAKIQDKEGIPPDQ 420



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 480 ENVKAKIQDKEGIPPDQ 496



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 556 ENVKAKIQDKEGIPPDQ 572



 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 632 ENVKAKIQDKEGIPPDQ 648


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 24  ENVKAKIQDKEGIPPDQ 40


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 20.2 bits (40), Expect = 2.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 107 EDADVKIQDFDDVPEDE 57
           E+   KIQD + +P D+
Sbjct: 72  ENVKAKIQDKEGIPPDQ 88



 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 92 KIQDFDDVPEDE 57
          KIQD + +P D+
Sbjct: 1  KIQDKEGIPPDQ 12


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 116 QYGEDADVKIQDFDDVPEDEDG 51
           ++GE A+ KI   D  P D +G
Sbjct: 49  RFGEQANEKIPLKDITPPDLEG 70


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 48  STVFILWDII 77
           S +FILW I+
Sbjct: 248 SVIFILWHIV 257


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 57  FILWDIIEILYFDVGIF 107
           FI WD +EI+    G F
Sbjct: 110 FIEWDKVEIVRSQEGRF 126


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 8/29 (27%), Positives = 18/29 (62%)
 Frame = -1

Query: 112 TAKMPTSKYKISMMSQRMKTVDN*MLFFI 26
           T+ +   + K+ + + R+ ++DN +LF I
Sbjct: 245 TSVLKLMQNKLEITACRLFSIDNALLFSI 273


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 19.0 bits (37), Expect = 4.5
 Identities = 8/37 (21%), Positives = 21/37 (56%)
 Frame = -1

Query: 112 TAKMPTSKYKISMMSQRMKTVDN*MLFFIKKKKKNLV 2
           ++ +  S+ ++ + + +  ++DN +LF     KK +V
Sbjct: 342 SSALKLSQNELEITACKFFSIDNALLFSANSTKKLIV 378


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +2

Query: 131 WSAIYYLS 154
           WSA+Y+L+
Sbjct: 233 WSALYFLT 240


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = +1

Query: 34  ITFNYQPXXXXXXXXXXCILTSASSPYC-MILSMVSNILSI 153
           IT N+             ILT+  + YC  ++ ++ N + +
Sbjct: 221 ITINFVVLLGDLYVTLYIILTNNQAKYCTTLIGLIKNCVIV 261


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 85  KISMMSQRMKTVDN*MLFFI 26
           KI + + R+  +DN +LF I
Sbjct: 338 KIEITACRLFNIDNALLFAI 357


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +3

Query: 66  WDIIEILYFDVGIFAVLYDI 125
           W I++ ++F V    + +DI
Sbjct: 213 WTILQTVFFTVPRVLMYFDI 232


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 95  RRHLRRTV*YCLWSAIYYLS 154
           R+ + +T  YC +  ++YLS
Sbjct: 312 RKTVLKTNKYCNFIILFYLS 331


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 26  YEK*HLIINRLHPL 67
           +E+   ++NR HPL
Sbjct: 324 HEELSAMVNRCHPL 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,120
Number of Sequences: 336
Number of extensions: 517
Number of successful extensions: 40
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 122,585
effective HSP length: 31
effective length of database: 112,169
effective search space used:  2131211
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)

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