Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P03
         (154 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          19   5.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    19   7.5  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    19   7.5  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    19   7.5  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          18   9.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      18   9.9  

>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 95  VKIQDFDDVPEDEDG 51
           +KI+   +VPE  DG
Sbjct: 115 LKIKGLCEVPESRDG 129


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  YFDVGIFAVLYDIVYG 134
           YF+ G+ +  Y + YG
Sbjct: 206 YFNRGLLSASYLVCYG 221


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +3

Query: 84  LYFDVGIFAVLYDIVYGQQYIIY 152
           L+F +G F  +   + G  Y  Y
Sbjct: 13  LFFIIGFFNAISGAIKGNDYQRY 35


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 18.6 bits (36), Expect = 7.5
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 87  YFDVGIFAVLYDIVYG 134
           YF+ G+ +  Y + YG
Sbjct: 82  YFNRGLLSASYLVCYG 97


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LWDIIEILYFDVGIFAVLYDIVYG 134
           +++++  LYF+  +    Y+I  G
Sbjct: 160 MYEVMPHLYFNDEVMQKAYNIAMG 183


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = +3

Query: 63  LWDIIEILYFDVGIFAVLYDIVYG 134
           +++++  LYF+  +    Y+I  G
Sbjct: 160 MYEVMPHLYFNDEVMQKAYNIAMG 183


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,757
Number of Sequences: 438
Number of extensions: 422
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 30
effective length of database: 133,203
effective search space used:  2664060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)