Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_P01
         (146 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   1.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    19   6.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    18   7.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 1.1
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 27  EDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKT 125
           ED+++ + K     E   +  KKED  +++KKT
Sbjct: 238 EDKDKDKPKIEDVGEDEDEDTKKED--KKKKKT 268


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 18.6 bits (36), Expect = 6.0
 Identities = 7/29 (24%), Positives = 12/29 (41%)
 Frame = +2

Query: 32  PQSPKKEDCNRRRKKTAIAEERRLQSPKK 118
           P      D NR      + + R ++ P+K
Sbjct: 260 PAETSMNDANRNDCAKPLTQIRNIRGPRK 288


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 18.2 bits (35), Expect = 7.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 72   FLRRLQSSFFGDCGLLSSAIAAS 4
            F+R L ++F     LLS+A++ S
Sbjct: 2466 FVRELSAAFKPKNLLLSAAVSPS 2488


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.313    0.125    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,288
Number of Sequences: 336
Number of extensions: 563
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 29
effective length of database: 112,841
effective search space used:  2143979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.4 bits)