Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_P01
(146 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0389 + 23055896-23056486,23056957-23057109,23057652-230579... 32 0.073
03_05_0519 - 25131614-25134778 31 0.097
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 31 0.17
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 29 0.52
02_04_0103 - 19768288-19768737 28 1.2
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 27 1.6
05_03_0595 + 15972381-15972566,15975641-15975710,15975813-15975868 27 2.8
05_01_0170 + 1180168-1180367,1181538-1181598,1181657-1181659,118... 27 2.8
01_01_1215 + 9815918-9816218,9816772-9816912,9816988-9817106,981... 27 2.8
10_05_0058 + 8662996-8663826 26 3.6
05_03_0368 - 13127536-13128429 26 3.6
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 26 3.6
01_05_0092 - 18058555-18060084 26 3.6
11_01_0133 + 1121392-1122731,1123417-1123858 26 4.8
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 26 4.8
12_01_0079 + 644754-645932,645966-646061,646193-647122 25 6.4
11_02_0027 - 7504076-7504904,7505024-7505219,7505401-7505467 25 6.4
11_01_0078 + 609005-610183,610217-610312,610444-611373 25 6.4
04_01_0434 - 5689923-5690078 25 6.4
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 25 6.4
02_01_0353 + 2545982-2549833 25 6.4
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 25 8.4
09_04_0537 + 18410201-18410207,18410301-18410586,18410674-184107... 25 8.4
08_01_0397 - 3509186-3510291,3510322-3512335 25 8.4
08_01_0279 - 2277487-2278161,2278513-2278662,2278749-2278843,227... 25 8.4
08_01_0191 + 1590948-1591607,1591694-1592176,1592449-1592451,159... 25 8.4
03_06_0670 + 35434203-35434355,35436601-35436729,35436978-354384... 25 8.4
>11_06_0389 +
23055896-23056486,23056957-23057109,23057652-23057957,
23058558-23058995
Length = 495
Score = 31.9 bits (69), Expect = 0.073
Identities = 15/46 (32%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Frame = +3
Query: 15 SPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK--TAIAEERR 146
SPKK++++ ++K+ AI SPKK++ +K+ T + E++R
Sbjct: 39 SPKKKEKHSKKKREAIDATMAAASPKKKEKKHSKKQEDTNVPEKKR 84
>03_05_0519 - 25131614-25134778
Length = 1054
Score = 31.5 bits (68), Expect = 0.097
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +2
Query: 8 AAIAEERRPQSP----KKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRK 142
A+ AEE++P++P K E+ + KK+A A+++ + KK+ + +K
Sbjct: 185 ASAAEEKKPEAPAEEKKAEEAKKEEKKSAEADKKEEKDDKKKSPEKGKK 233
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 1 ARGCNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 144
A +K A AEE++ + KKE+ KK+A A+++ + KK+
Sbjct: 184 AASAAEEKKPEAPAEEKKAEEAKKEE-----KKSAEADKKEEKDDKKK 226
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = +3
Query: 15 SPKKEDRNRRRKKTAIAEE---RRLQSPKKEDCNRRRKKTAIAEERR 146
S ++++R RRR+ + EE RRL+ +++ ++ R++ IAE RR
Sbjct: 535 SDEEDNRKRRRRSSGTLEERKRRRLREKEEDLADKLREEEEIAEARR 581
Score = 28.7 bits (61), Expect = 0.68
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 12 QSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 146
+ +++DR R RK+ + +E S ++++ RRR+ + EER+
Sbjct: 513 EKEREKDRERERKREIMKQED--DSDEEDNRKRRRRSSGTLEERK 555
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 29.1 bits (62), Expect = 0.52
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 3 TRLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 146
T + ++ R RRR+K EERR + KE R+RK+ ER+
Sbjct: 125 TDSEEERRRRRRRRRRKEREEEERRRRRKDKE--RRKRKEKERERERK 170
Score = 27.9 bits (59), Expect = 1.2
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 16 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKKE 144
RRR+K EERR + KE RR++K E R + KK+
Sbjct: 137 RRRRKEREEEERRRRRKDKE---RRKRKEKERERERKKKEKKK 176
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 16 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPKK 141
RRR++ EE + +K+ R+RK+ ER+ + KK
Sbjct: 135 RRRRRRKEREEEERRRRRKDKERRKRKEKERERERKKKEKKK 176
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/47 (21%), Positives = 25/47 (53%)
Frame = +3
Query: 6 RLQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 146
R + ++E+ RRR++ +R + ++ + ++ KK EE++
Sbjct: 137 RRRRKEREEEERRRRRKDKERRKRKEKERERERKKKEKKKRRKEEKK 183
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 26 RRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKK 145
RR + ++E+ RRR+K +ERR + K+ + R++K+
Sbjct: 137 RRRRKEREEEERRRRRKD---KERRKRKEKERERERKKKE 173
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 12 QSPKKEDRNRRRKKTAIAE-ERRLQSPKKEDCNRRRKKTAIAEERR 146
++ +E+R RRR++ E E + +++D RR++K E R
Sbjct: 124 ETDSEEERRRRRRRRRRKEREEEERRRRRKDKERRKRKEKERERER 169
Score = 25.0 bits (52), Expect = 8.4
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 8 AAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKK 145
A E + ++ RRR+K EERR + KE R+ K+
Sbjct: 119 AGSESETDSEEERRRRRRRRRRKEREEEERRRRRKDKERRKRKEKE 164
>02_04_0103 - 19768288-19768737
Length = 149
Score = 27.9 bits (59), Expect = 1.2
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +3
Query: 9 LQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 122
+ P +E R R+RK+ ++++ + KK+ +++KK
Sbjct: 96 IDGPMREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKK 133
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/38 (23%), Positives = 23/38 (60%)
Frame = +3
Query: 9 LQSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 122
++ ++ R R+RKK ++++ + KK+ +++KK
Sbjct: 100 MREKRRRKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKK 137
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/40 (25%), Positives = 24/40 (60%)
Frame = +3
Query: 21 KKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE 140
+K R R++KK ++++ + KK+ +++KK A++
Sbjct: 106 RKRKRKRKKKKKKKKKKKKKKKKKKKKKKKKKKKGMEADK 145
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 27 EDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 146
E+R RR ++ A + ++E+ RRRK+ + EE R
Sbjct: 232 EERARREEEEGRARAEEERRRREEERRRRRKEEKVREEAR 271
Score = 27.5 bits (58), Expect = 1.6
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 21 KKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAE 137
++E+R RRRK+ + EE R ++E+ RR T +A+
Sbjct: 253 REEERRRRRKEEKVREEAR----RREEQRRRLGITVVAD 287
>05_03_0595 + 15972381-15972566,15975641-15975710,15975813-15975868
Length = 103
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 11 AIAEERRPQSPKKEDCNRRRKKTAIAEERR 100
A+ EER+P S DC +R + A+ E RR
Sbjct: 8 AVEEERKPLSEVVGDCVQRWFQDALKEARR 37
>05_01_0170 +
1180168-1180367,1181538-1181598,1181657-1181659,
1182396-1182443,1182979-1184595
Length = 642
Score = 26.6 bits (56), Expect = 2.8
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +1
Query: 13 NRRRKKTAIAEERRLQ----SPKKEDCNRRRKKTAIAEERRLQSPKK 141
+RRR AEE + Q + K ED R+ + + AEE RLQ +K
Sbjct: 136 SRRRHTQQEAEEAKKQEQAATSKLEDLQRQLAEFSAAEESRLQELRK 182
Score = 25.4 bits (53), Expect = 6.4
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 2 HEAAIAEERRPQ----SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRR 139
H AEE + Q + K ED R+ + + AEE RLQ +K R R
Sbjct: 140 HTQQEAEEAKKQEQAATSKLEDLQRQLAEFSAAEESRLQELRKVSQERDR 189
>01_01_1215 +
9815918-9816218,9816772-9816912,9816988-9817106,
9817922-9818191,9818330-9818369,9818519-9818616,
9818745-9818825
Length = 349
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 32 PQSPKKEDCNRRRKKTAIAEERRLQSPKKED 124
PQ+ +E+ R +++ +A E RLQ ++E+
Sbjct: 12 PQAHAEEEPGRGKRRRVVARETRLQQEEEEE 42
>10_05_0058 + 8662996-8663826
Length = 276
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 17 AEERRPQSPKKEDCNRRRKKTAIA---EERRLQSPKKEDCNRRR 139
A + +P+K CN+R++ A+A +E +L++ +K+ R R
Sbjct: 184 ANKANTAAPRKAACNKRKEAPALAPEMDEAKLEAARKKLRERYR 227
>05_03_0368 - 13127536-13128429
Length = 297
Score = 26.2 bits (55), Expect = 3.6
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +3
Query: 12 QSPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 122
+ KKE + R+++++ + +S KED + R+K
Sbjct: 191 EEEKKEKKTSRQRRSSRGRSKHRRSSSKEDKKKSRRK 227
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 15 SPKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKK 122
S +DR RRRK+ + +++ + +K D R RK+
Sbjct: 265 SSSSDDRRRRRKRHS-KKDKHKRGKRKRDRRRERKR 299
>01_05_0092 - 18058555-18060084
Length = 509
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 11 AIAEERRPQSPKKEDCNRRRKKTAI 85
A E+ P+SP K NR++KK A+
Sbjct: 105 AAQEDDLPESPPKSKKNRKKKKKAL 129
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 25.8 bits (54), Expect = 4.8
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 18 PKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERR 146
P + D+ RR + E + QSPK A A+ER+
Sbjct: 168 PPQPDKRRREPQCQEQEPNQPQSPKPPTAEETAAAAAAAKERK 210
Score = 25.0 bits (52), Expect = 8.4
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 20 EERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKE 121
E +PQSPK A A+ER+ + +K+
Sbjct: 184 EPNQPQSPKPPTAEETAAAAAAAKERKEEQRRKQ 217
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 18 PKKEDRNRRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEE 140
PKK ++RRR + E RR ++D +RR+ ++
Sbjct: 287 PKKSRKDRRRHDSEDEEPRRKHQRSEDDEPKRRQSEVSGDD 327
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 20 EERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRK 142
E+ PKK +RRR + E RR ++D +RR+
Sbjct: 280 EDSEDDKPKKSRKDRRRHDSEDEEPRRKHQRSEDDEPKRRQ 320
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 21 KKEDRNRRRKKTAIAEE-RRLQSPKKEDCNRRRKKTAIAEE 140
++E+R +R + + EE RRL+ K E R + T + E+
Sbjct: 232 EEEERKQREEMAKLVEERRRLRDEKAEAEERSKGATPVGEK 272
>11_02_0027 - 7504076-7504904,7505024-7505219,7505401-7505467
Length = 363
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 8 AAIAEERRPQSPKKEDCNRRRKKTAIAEERRLQS 109
A +A+ER P K+DCN K R L S
Sbjct: 8 ADVADEREPPPSGKKDCNYGNGKWVSDNNRPLYS 41
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 25.4 bits (53), Expect = 6.4
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 21 KKEDRNRRRKKTAIAEE-RRLQSPKKEDCNRRRKKTAIAEE 140
++E+R +R + + EE RRL+ K E R + T + E+
Sbjct: 232 EEEERKQREEMAKLVEERRRLRDEKAEAEERSKGATPVGEK 272
>04_01_0434 - 5689923-5690078
Length = 51
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 16 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER 120
RRR+ TA+ + + + R++ TA+A +R
Sbjct: 8 RRRRNTAVVDTATTERKRNTVALERKRNTAVARKR 42
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 39 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER 143
RRR+ TA+ + + + R++ TA+A +R
Sbjct: 8 RRRRNTAVVDTATTERKRNTVALERKRNTAVARKR 42
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 25.4 bits (53), Expect = 6.4
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 21 KKEDRNRRRKKTAIAEERRLQSPKKED 101
KKE+ + ++K A+ E++ + +PK+ +
Sbjct: 147 KKEEEEKAKEKKAVPEQQPVAAPKRRN 173
>02_01_0353 + 2545982-2549833
Length = 1283
Score = 25.4 bits (53), Expect = 6.4
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 21 KKEDRNRRRKKTAIAEERRLQSPKKED 101
KKE+ + ++K A+ E++ + +PK+ +
Sbjct: 171 KKEEEEKAKEKKAVPEQQPVAAPKRRN 197
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 25.0 bits (52), Expect = 8.4
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 144 FFLRRLQSSFFGD--CSLLSSAIAVFFLRRLQSSFFGDCGLLSSAIAA 7
F L LQ +++ S+LSS LRR F DC L + I A
Sbjct: 87 FVLHALQENYYSSNLSSVLSSEAIYPKLRRYAVETFRDCRYLGTRICA 134
>09_04_0537 +
18410201-18410207,18410301-18410586,18410674-18410773,
18410881-18411147,18411286-18411363,18411444-18411545,
18411628-18411677,18411793-18411889,18412248-18412361,
18412495-18412666,18412865-18413217,18413812-18413898,
18413981-18414001
Length = 577
Score = 25.0 bits (52), Expect = 8.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 23 ERRPQSPKKEDCNRRRKKTAIAEERRLQSPKKEDCNRRRKK 145
E P P ED RRR + + +++ +K RRR++
Sbjct: 10 EISPCDPNSEDDRRRRGMGSSLRRKAIRALRKRGGRRRRRR 50
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 25.0 bits (52), Expect = 8.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +3
Query: 21 KKEDRNRR-RKKTAIAEERRLQSPKKEDCNRRRKKTAIAEER 143
+ DR RR R+K EER+ + ++ + + R++ EER
Sbjct: 53 RDRDRERRHREKERDREERKAREREEREKEKERERARRREER 94
>08_01_0279 -
2277487-2278161,2278513-2278662,2278749-2278843,
2279367-2279865
Length = 472
Score = 25.0 bits (52), Expect = 8.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 16 RRRKKTAIAEERRLQSPKKEDCNRRRKKTAIAEERRLQSPK 138
RRR + + +RRLQ+ ED ++ A EE Q PK
Sbjct: 28 RRRSRGRVLGKRRLQADDDED----EEEEAELEEEEKQEPK 64
>08_01_0191 +
1590948-1591607,1591694-1592176,1592449-1592451,
1592555-1592992
Length = 527
Score = 25.0 bits (52), Expect = 8.4
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +3
Query: 15 SPKKEDRNRRRKKTAIAEERRLQS----PKKEDCNRRRKKTAIAEERR 146
S ++ED RRR+ EERR S ++E+ +RR + +I +E +
Sbjct: 124 SQEQEDDERRRRGRRGDEERRRSSEGEEEEEEETSRRSFEQSIRDEHQ 171
>03_06_0670 +
35434203-35434355,35436601-35436729,35436978-35438409,
35438524-35439014
Length = 734
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +3
Query: 15 SPKKEDRNRRRKKTAIAEERRLQSPKKEDCNR 110
+PKK+ +R +I ++R SP KE +
Sbjct: 303 APKKDGMGQRINNISILVQKRTDSPNKETAKK 334
Score = 25.0 bits (52), Expect = 8.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 38 SPKKEDCNRRRKKTAIAEERRLQSPKKEDCNR 133
+PKK+ +R +I ++R SP KE +
Sbjct: 303 APKKDGMGQRINNISILVQKRTDSPNKETAKK 334
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.313 0.125 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,085,764
Number of Sequences: 37544
Number of extensions: 63614
Number of successful extensions: 480
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 415
length of database: 14,793,348
effective HSP length: 29
effective length of database: 13,704,572
effective search space used: 260386868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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