Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O24
         (433 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   4.5  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   7.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   7.8  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 315 SASYLIDLIIIGFSKNNTRTY*RDDIER 398
           S  YL+ ++   + +NN     R+++E+
Sbjct: 233 SKEYLVSIMFSHYDRNNNGNLEREELEQ 260


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/32 (21%), Positives = 15/32 (46%)
 Frame = -2

Query: 390 YRLFSMFACYFY*ILLLLNQSGNSRCSLNKTC 295
           + + ++   Y Y ++ +L  S +  C    TC
Sbjct: 88  FSVLTILISYIYILMAILRMSADGGCRNFSTC 119


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/35 (22%), Positives = 20/35 (57%)
 Frame = -2

Query: 396 VRYRLFSMFACYFY*ILLLLNQSGNSRCSLNKTCQ 292
           +R+    + +  FY +L++++  GN+   +  TC+
Sbjct: 31  MRFNEGHIVSIVFYSVLMIISAIGNTTVLILITCR 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,436
Number of Sequences: 438
Number of extensions: 2724
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)