Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O23
         (324 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028421-1|AAH28421.1| 1154|Homo sapiens WD repeat domain 66 pro...    29   2.4  
EF055487-1|ABK56022.1|  456|Homo sapiens shootin1 protein.             28   5.6  
BC032303-1|AAH32303.1|  558|Homo sapiens KIAA1598 protein protein.     28   5.6  
BC000322-1|AAH00322.1| 1193|Homo sapiens sperm associated antige...    28   5.6  
AL137585-1|CAB70827.1| 1027|Homo sapiens hypothetical protein pr...    28   5.6  
AF399910-1|AAK91712.1| 1193|Homo sapiens mitotic spindle associa...    28   5.6  
AB046818-1|BAB13424.1|  446|Homo sapiens KIAA1598 protein protein.     28   5.6  

>BC028421-1|AAH28421.1| 1154|Homo sapiens WD repeat domain 66 protein.
          Length = 1154

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +2

Query: 68   LTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEV 241
            L V  N +P     +  I K+FE       K  K I +ED  R+LV+   EH   EE+
Sbjct: 1036 LKVYLNHKPPFGNTMSGIHKSFEVLGYTNSKGKKAIRREDFLRLLVT-KGEHMTEEEM 1092


>EF055487-1|ABK56022.1|  456|Homo sapiens shootin1 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 116 LIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHNT 274
           L E+  ++   +K ++ +Q+  E LH+ + ++  + E LEE  K  +LK  N+
Sbjct: 276 LEEERIQHQQKVK-ELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNS 327


>BC032303-1|AAH32303.1|  558|Homo sapiens KIAA1598 protein protein.
          Length = 558

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 116 LIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHNT 274
           L E+  ++   +K ++ +Q+  E LH+ + ++  + E LEE  K  +LK  N+
Sbjct: 276 LEEERIQHQQKVK-ELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNS 327


>BC000322-1|AAH00322.1| 1193|Homo sapiens sperm associated antigen 5
            protein.
          Length = 1193

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/84 (26%), Positives = 40/84 (47%)
 Frame = +2

Query: 44   LSHAVATELTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEH 223
            L  A+A +L   +N +P A+  +   EK + + +V KL+V    MK +  ++++      
Sbjct: 1089 LQEALAGQLD--SNCQPMATNWIQ--EKVWLSQEVDKLRVMFLEMKNEKEKLMIKFQSHR 1144

Query: 224  EALEEVAKHYDLKKHNTFYVVQRI 295
              LEE  +  D +      +VQ I
Sbjct: 1145 NILEENLRRSDKELEKLDDIVQHI 1168


>AL137585-1|CAB70827.1| 1027|Homo sapiens hypothetical protein
            protein.
          Length = 1027

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/84 (26%), Positives = 40/84 (47%)
 Frame = +2

Query: 44   LSHAVATELTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEH 223
            L  A+A +L   +N +P A+  +   EK + + +V KL+V    MK +  ++++      
Sbjct: 923  LQEALAGQLD--SNCQPMATNWIQ--EKVWLSQEVDKLRVMFLEMKNEKEKLMIKFQSHR 978

Query: 224  EALEEVAKHYDLKKHNTFYVVQRI 295
              LEE  +  D +      +VQ I
Sbjct: 979  NILEENLRRSDKELEKLDDIVQHI 1002


>AF399910-1|AAK91712.1| 1193|Homo sapiens mitotic spindle associated
            protein protein.
          Length = 1193

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/84 (26%), Positives = 40/84 (47%)
 Frame = +2

Query: 44   LSHAVATELTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEH 223
            L  A+A +L   +N +P A+  +   EK + + +V KL+V    MK +  ++++      
Sbjct: 1089 LQEALAGQLD--SNCQPMATNWIQ--EKVWLSQEVDKLRVMFLEMKNEKEKLMIKFQSHR 1144

Query: 224  EALEEVAKHYDLKKHNTFYVVQRI 295
              LEE  +  D +      +VQ I
Sbjct: 1145 NILEENLRRSDKELEKLDDIVQHI 1168


>AB046818-1|BAB13424.1|  446|Homo sapiens KIAA1598 protein protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = +2

Query: 116 LIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHNT 274
           L E+  ++   +K ++ +Q+  E LH+ + ++  + E LEE  K  +LK  N+
Sbjct: 266 LEEERIQHQQKVK-ELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNS 317


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,053,414
Number of Sequences: 237096
Number of extensions: 921580
Number of successful extensions: 1980
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1980
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)