Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O23
(324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical pr... 31 0.25
Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical pr... 29 1.0
U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical pr... 28 1.8
U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical pr... 28 1.8
U21322-8|AAA62544.1| 662|Caenorhabditis elegans Abnormal embroy... 27 2.3
AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical ... 27 2.3
Z78539-8|CAE17715.1| 223|Caenorhabditis elegans Hypothetical pr... 27 3.1
Z69661-7|CAE17832.1| 223|Caenorhabditis elegans Hypothetical pr... 27 3.1
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical pr... 26 5.4
AF003151-10|AAK18913.2| 477|Caenorhabditis elegans Hypothetical... 26 5.4
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical pr... 25 9.5
U41033-2|AAA82373.1| 328|Caenorhabditis elegans Hypothetical pr... 25 9.5
AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical... 25 9.5
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 25 9.5
AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein. 25 9.5
AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like ... 25 9.5
>Z75553-3|CAA99948.1| 407|Caenorhabditis elegans Hypothetical
protein ZC443.3 protein.
Length = 407
Score = 30.7 bits (66), Expect = 0.25
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Frame = +2
Query: 20 EKISSFDPLSHAVATELT----VVANDEPTASEIVGLIEKTFENSDVIKLKVN----KQI 175
+KI + + +V ELT VVA + I+ L K ++ + K N K
Sbjct: 223 QKIEELEKKNVSVVCELTKPETVVAAPVQVENVIISLPVKEDDSLAISAAKANLIQKKHQ 282
Query: 176 MKEDLHRILVSVADEHEALEEVAKHYDLKKHNT 274
K + ++SV +HEA +VAK +KK T
Sbjct: 283 SKSSTEKSMMSVTKKHEAKFKVAKSVTVKKDKT 315
>Z68004-1|CAA91981.1| 435|Caenorhabditis elegans Hypothetical
protein F47B10.1 protein.
Length = 435
Score = 28.7 bits (61), Expect = 1.0
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 44 LSHAVATELTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLH 193
L+H +A ++ + E ASEI+ + + F+ SD +++N M ED++
Sbjct: 189 LAHEIAVKMGFSKDCEQQASEIIEKLYQMFKGSDATLVEINP--MAEDVN 236
>U64840-6|AAB04964.1| 574|Caenorhabditis elegans Hypothetical
protein ZC317.7 protein.
Length = 574
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 218 HQRPIPECGAGLPSLSVYSLLTL 150
HQRP+P C GL +L SL T+
Sbjct: 161 HQRPMPYCPPGLLALKQKSLATM 183
>U53141-5|AAA96107.1| 574|Caenorhabditis elegans Hypothetical
protein C14C11.2 protein.
Length = 574
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 218 HQRPIPECGAGLPSLSVYSLLTL 150
HQRP+P C GL +L SL T+
Sbjct: 161 HQRPMPYCPPGLLALKQKSLATM 183
>U21322-8|AAA62544.1| 662|Caenorhabditis elegans Abnormal
embroygenesis protein 8 protein.
Length = 662
Score = 27.5 bits (58), Expect = 2.3
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 107 IVGLIEKTFENSDVIKLKVNKQIMKEDLHRIL-VSVADEHEALEE 238
+ GL KT+E+ + I ++++KQ+ K RI + + D+ LEE
Sbjct: 163 VFGLGNKTYEHFNEIGIQMDKQLEKLGAKRIFHLGLGDDDANLEE 207
>AF003388-4|AAB54269.1| 1150|Caenorhabditis elegans Hypothetical
protein R10F2.6 protein.
Length = 1150
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 119 IEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHN 271
+EK+ + I+LKV KQ + H +S ++EA EV++ + KK N
Sbjct: 31 VEKSINSGKWIRLKVKKQSTGGEKHLAAIS---KNEATFEVSEDANFKKIN 78
>Z78539-8|CAE17715.1| 223|Caenorhabditis elegans Hypothetical
protein F48F7.8 protein.
Length = 223
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 188 LHRILVSVADEHEALEEVAKHYDLKKHNTFY 280
LHRI S+A ++ L A+++ L H FY
Sbjct: 111 LHRIFYSLASQNILLSGFAEYFTLWLHRIFY 141
>Z69661-7|CAE17832.1| 223|Caenorhabditis elegans Hypothetical
protein F48F7.8 protein.
Length = 223
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 188 LHRILVSVADEHEALEEVAKHYDLKKHNTFY 280
LHRI S+A ++ L A+++ L H FY
Sbjct: 111 LHRIFYSLASQNILLSGFAEYFTLWLHRIFY 141
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 158 KVNKQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHN 271
K+ +Q KE +++ A+ LEE+ KH++ K N
Sbjct: 3368 KIERQ-NKESFNQVFTPKANGFHVLEEIEKHFNYKIEN 3404
Score = 25.8 bits (54), Expect = 7.2
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +2
Query: 83 NDEPTASEIVGLIEKTFENSDVIKLKVNK------QIMKEDLHRILVSVADEHEALEEVA 244
+DE TAS+I + +++ K + +IMKE ++ I SV EH LE ++
Sbjct: 3000 DDEITASDIFDYPTVDELSDHIVRKKSSSVPPAASEIMKETMNGISTSVDAEHTKLENLS 3059
Query: 245 KHYDL 259
+ + L
Sbjct: 3060 QSFML 3064
>Z69662-4|CAA93504.1| 244|Caenorhabditis elegans Hypothetical
protein F56D5.5 protein.
Length = 244
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/58 (22%), Positives = 29/58 (50%)
Frame = +2
Query: 137 NSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHNTFYVVQRIPLFQD 310
N + KLK +KE+L R + + E++ K + +K N+ ++ + + +Q+
Sbjct: 60 NLETKKLKTEIAFLKEELGREGKKLTIANTVHEQLKKDLEAEKRNSMFLSELLTFYQN 117
>AF003151-10|AAK18913.2| 477|Caenorhabditis elegans Hypothetical
protein D1007.5a protein.
Length = 477
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 212 ADEHEALEEVAKHYDLKKHNTFYVVQRIP 298
A ++ VA H + +HNTF+ V R P
Sbjct: 373 AKSSNSIRTVAAHPESSRHNTFFKVLRKP 401
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +2
Query: 65 ELTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVA 244
EL ++A E E L E ++ +I L ++++ +E I E + ++EV
Sbjct: 1493 ELPIIALSERVIIETDSL-ESDIKSLPMILLDTSEEVSRETTLEIT-----EQQRIDEVL 1546
Query: 245 KHYDLKKHNTFYVVQRI 295
K+Y K+ + ++++I
Sbjct: 1547 KYYSEFKYRKYELIRKI 1563
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 25.8 bits (54), Expect = 7.2
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +2
Query: 65 ELTVVANDEPTASEIVGLIEKTFENSDVIKLKVNKQIMKEDLHRILVSVADEHEALEEVA 244
EL ++A E E L E ++ +I L ++++ +E I E + ++EV
Sbjct: 1493 ELPIIALSERVIIETDSL-ESDIKSLPMILLDTSEEVSRETTLEIT-----EQQRIDEVL 1546
Query: 245 KHYDLKKHNTFYVVQRI 295
K+Y K+ + ++++I
Sbjct: 1547 KYYSEFKYRKYELIRKI 1563
>Z92807-2|CAD21652.1| 689|Caenorhabditis elegans Hypothetical
protein K11D9.1b protein.
Length = 689
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/50 (18%), Positives = 26/50 (52%)
Frame = +2
Query: 2 HEALPYEKISSFDPLSHAVATELTVVANDEPTASEIVGLIEKTFENSDVI 151
H + + + + +S + E T+V ++EP+A++ + K + + ++
Sbjct: 630 HRRVAVDHVRNLKDMSEKIIRETTIVLSNEPSAAQKAECLAKLDQLAQIV 679
>Z92807-1|CAB07264.1| 747|Caenorhabditis elegans Hypothetical
protein K11D9.1a protein.
Length = 747
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/50 (18%), Positives = 26/50 (52%)
Frame = +2
Query: 2 HEALPYEKISSFDPLSHAVATELTVVANDEPTASEIVGLIEKTFENSDVI 151
H + + + + +S + E T+V ++EP+A++ + K + + ++
Sbjct: 688 HRRVAVDHVRNLKDMSEKIIRETTIVLSNEPSAAQKAECLAKLDQLAQIV 737
>Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical
protein T03F7.7b protein.
Length = 394
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 265 LLKVIMLSYFLQSFMLISDRYQNAV 191
+LKV+ LSY L S+ ++ + + A+
Sbjct: 120 ILKVMPLSYVLHSYFMLQENFSRAM 144
>Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical
protein T03F7.7a protein.
Length = 368
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 265 LLKVIMLSYFLQSFMLISDRYQNAV 191
+LKV+ LSY L S+ ++ + + A+
Sbjct: 120 ILKVMPLSYVLHSYFMLQENFSRAM 144
>U41033-2|AAA82373.1| 328|Caenorhabditis elegans Hypothetical
protein K09E3.6 protein.
Length = 328
Score = 25.4 bits (53), Expect = 9.5
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 104 EIVGLIEKTFENSDVIKLKVN-KQIMKEDLHRILVSVADEHEALEEVAKHYDLKKHNTFY 280
E G++ KT D+ + N K+++++ + RI ++ HE +E+ YD K+ +Y
Sbjct: 76 EKTGMLVKT---DDIWTIYDNIKKVVRKKM-RISINKGKTHEEMEQFLNEYDYFKYFKYY 131
>AL033514-32|CAA22112.1| 344|Caenorhabditis elegans Hypothetical
protein Y75B8A.34 protein.
Length = 344
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 295 YPLDHVECVVLLKVIMLSYFLQSFMLISDRYQNAVQVFLHYL 170
+PL + C ++L ++ S Q+F R Q +VF+ L
Sbjct: 219 FPLASIACYIVLFYVLRSQNKQAFTKSKSRNQGEQKVFVQLL 260
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 227 ALEEVAKHYDLKKHNTFYVVQ 289
+L E++ DLK H FYVVQ
Sbjct: 840 SLVEISIREDLKLHEPFYVVQ 860
>AB039949-1|BAC06512.1| 747|Caenorhabditis elegans kinesin protein.
Length = 747
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/50 (18%), Positives = 26/50 (52%)
Frame = +2
Query: 2 HEALPYEKISSFDPLSHAVATELTVVANDEPTASEIVGLIEKTFENSDVI 151
H + + + + +S + E T+V ++EP+A++ + K + + ++
Sbjct: 688 HRRVAVDHVRNLKDMSEKIIRETTIVLSNEPSAAQKAECLAKLDQLAQIV 737
>AB017164-1|BAA32661.1| 689|Caenorhabditis elegans Kinesin like
protein (klp-7) protein.
Length = 689
Score = 25.4 bits (53), Expect = 9.5
Identities = 9/50 (18%), Positives = 26/50 (52%)
Frame = +2
Query: 2 HEALPYEKISSFDPLSHAVATELTVVANDEPTASEIVGLIEKTFENSDVI 151
H + + + + +S + E T+V ++EP+A++ + K + + ++
Sbjct: 630 HRRVAVDHVRNLKDMSEKIIRETTIVLSNEPSAAQKAECLAKLDQLAQIV 679
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,508,754
Number of Sequences: 27780
Number of extensions: 136623
Number of successful extensions: 445
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -