Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O23
         (324 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   0.70 
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   1.2  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        22   2.1  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   3.7  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   4.9  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 0.70
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 203 VSVADEHEALEEVAKHYD 256
           V++ D H A E   KHY+
Sbjct: 357 VTIVDHHTASESFMKHYE 374


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 51  WERGSNELIFSYG 13
           W+ GSN++ FS G
Sbjct: 406 WDNGSNQIAFSRG 418


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.8 bits (44), Expect = 2.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 136 LKSLLNKPNDLGSRGFVV 83
           L++ L K  DLG+ GF++
Sbjct: 315 LEATLRKITDLGADGFII 332


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +2

Query: 251 YDLKKHNTFY 280
           YDLK HN  Y
Sbjct: 153 YDLKSHNDIY 162


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 168 LFTFNFITSEFSKVFSISP 112
           LF  N   S+F  +F +SP
Sbjct: 55  LFVINLAISDFLMMFCMSP 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,699
Number of Sequences: 438
Number of extensions: 1826
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)