Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O22
(319 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1361 - 25998873-25999223,25999311-25999461,25999546-259997... 31 0.26
08_02_1557 + 27867977-27869134 29 0.79
08_01_0303 + 2493388-2493954 28 1.8
01_06_0240 + 27794741-27795466 28 1.8
11_05_0096 - 19029632-19029937,19030376-19031197 27 2.4
02_05_1217 + 34999631-34999945,35000670-35000835,35001908-350020... 27 3.2
12_01_0591 - 4835894-4836328,4836343-4837882,4838911-4839050,484... 27 4.2
08_02_1380 - 26547273-26547409,26548038-26548097,26549347-26549689 27 4.2
03_06_0230 - 32518749-32519143,32519301-32519589 27 4.2
03_02_0689 - 10423661-10424343,10425580-10425628 27 4.2
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815... 26 5.6
01_06_0004 + 25507739-25508206,25509346-25509477,25509910-255100... 26 5.6
12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421... 26 7.4
05_07_0066 + 27453611-27453627,27454729-27454872,27455998-274566... 26 7.4
03_05_0378 - 23619169-23619225,23619389-23619454,23620052-236202... 26 7.4
01_06_1842 - 40278875-40280131 26 7.4
12_01_0281 + 2059397-2059721,2059807-2060675,2086761-2086910 25 9.7
08_02_0323 - 15765631-15765903 25 9.7
07_03_1251 + 25186333-25188027,25188113-25188208,25188292-251883... 25 9.7
07_03_0634 + 20125242-20125688 25 9.7
06_03_0970 + 26424209-26424910,26425053-26425109,26425251-264254... 25 9.7
02_05_0587 + 30162806-30163183,30163315-30163478,30163571-301636... 25 9.7
01_06_1717 + 39404449-39405062,39405157-39406321 25 9.7
>07_03_1361 -
25998873-25999223,25999311-25999461,25999546-25999783,
25999898-26000108,26000210-26000340,26000909-26001037,
26001329-26002130
Length = 670
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)
Frame = -3
Query: 167 LSASVQRTQASGSTAGSSPVRASAAYPLARSQAWCK------SLAASVPDT-AWMHACLN 9
L+A+ T A+ G+ + YP+ S AWC A + DT A MHA N
Sbjct: 165 LNATADYTAAAARRFGTGEISFDPTYPVIYSMAWCTPDMAPGRCRACLADTIAQMHAYFN 224
Query: 8 P 6
P
Sbjct: 225 P 225
>08_02_1557 + 27867977-27869134
Length = 385
Score = 29.1 bits (62), Expect = 0.79
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 110 VRASAAYPLARSQAWCKSLAASVP 39
V AS+AYP Q+ CKS AAS P
Sbjct: 218 VAASSAYPYRARQSSCKSSAASSP 241
>08_01_0303 + 2493388-2493954
Length = 188
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +1
Query: 22 CIHAVSGTDAAKDLHQACDLARGYAALALTGLLPAVLPDACVRC 153
C HA+S AA +LH+ C R + L T L A VRC
Sbjct: 15 CHHAISRRSAAVELHR-CSRRRRPSPLTTTVALTRRRSPAAVRC 57
>01_06_0240 + 27794741-27795466
Length = 241
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 118 LPAVLPDACVRCTDADKPHAIGDV 189
+PA P A VRCT A KP A G +
Sbjct: 24 IPAATPSAIVRCTAAPKP-ATGSI 46
>11_05_0096 - 19029632-19029937,19030376-19031197
Length = 375
Score = 27.5 bits (58), Expect = 2.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 55 KDLHQACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGD 186
+ L D+ G+ A+A + A PD ++CT D PH + D
Sbjct: 206 RGLRSLVDVGGGHGAVAKA--IAAAFPD--IKCTVMDLPHVVAD 245
>02_05_1217 +
34999631-34999945,35000670-35000835,35001908-35002005,
35002245-35002319,35002413-35002481,35002552-35002637,
35002710-35002827,35003575-35003902,35003995-35005682,
35005822-35005881,35005953-35006027,35006105-35006197,
35006298-35006372,35006464-35006532,35006614-35006682,
35006994-35007113
Length = 1167
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 193 QLKVPNKQADIVVSFETTQSNEQSCKELVMPLITQLVDKLKS 318
++K+ + A ++ + K+LV PLITQ++D+ S
Sbjct: 148 KVKIVTRDASLLAGAADYSAFPMLLKQLVTPLITQILDRRSS 189
>12_01_0591 -
4835894-4836328,4836343-4837882,4838911-4839050,
4840051-4840605
Length = 889
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 240 FEGDDNICLLVWHFELINVSDGVR 169
FEGDD IC+L L+ + G+R
Sbjct: 753 FEGDDGICILAKLPSLVQLDLGIR 776
>08_02_1380 -
26547273-26547409,26548038-26548097,26549347-26549689
Length = 179
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 86 LARSQAWCKSLAASVPDTAWMHAC 15
LA AWC + AA+ PD A C
Sbjct: 9 LAAVVAWCVAAAAAAPDAALQSKC 32
>03_06_0230 - 32518749-32519143,32519301-32519589
Length = 227
Score = 26.6 bits (56), Expect = 4.2
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -3
Query: 164 SASVQRTQASGSTAGSSPVRASAAYPLARSQAWCKSLAAS 45
+A+ R S + A SSP SAA AR A + AAS
Sbjct: 25 AAAASRAARSSAVASSSPCARSAAVVAARRAARSAAAAAS 64
>03_02_0689 - 10423661-10424343,10425580-10425628
Length = 243
Score = 26.6 bits (56), Expect = 4.2
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 4 RGFRQACIHAVSGTDAAKDLHQACDLARGYAALALTGLLPAVLPDA-CVRCT 156
RG + A G A +D H A L RG+ A L G P V D C R T
Sbjct: 97 RGDWRGDTDADPGRPARRDRHLARLLRRGWRAACLPGEQPQVADDVLCPRRT 148
>01_06_0213 +
27580635-27581105,27581206-27581298,27581376-27581540,
27581640-27581862,27582329-27582429,27582666-27582713,
27583086-27583172,27583745-27583879,27583985-27584140,
27585336-27585545,27585641-27586351,27586429-27586974,
27587872-27588495,27588595-27588699,27590460-27590711,
27590939-27591766
Length = 1584
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 140 ASGSTAGSSPVRASAAY-PLARSQAWCKSLAASVPDTAWMH 21
+S +T+ SPVRAS+ Y + + A K + S +W+H
Sbjct: 723 SSANTSSDSPVRASSEYHEVPPTDAEDKEIDESNQGESWVH 763
>01_06_0004 +
25507739-25508206,25509346-25509477,25509910-25510086,
25510175-25510219,25510305-25510512,25510766-25510825,
25510826-25511016,25511219-25511614
Length = 558
Score = 26.2 bits (55), Expect = 5.6
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 34 VSGTDAAKDLHQACDLARGYAALALTG--LLPAVLPDACVRCTDADKPHAIGDVYQLKVP 207
+ GT K +H AC + + + LTG L P +P R D A G++Y VP
Sbjct: 479 IRGTFTIKPVHFACSDSSPCSGITLTGVQLRPVQIPH--YRLNDPFCWQAFGELYTPTVP 536
>12_01_0535 +
4208410-4208661,4209529-4209627,4210125-4210265,
4210378-4210560,4210664-4210821,4210905-4211004,
4211085-4211196,4211241-4211419,4211489-4211674,
4211762-4211929
Length = 525
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 169 PHAIGDVYQLKVPNKQADIVVSF 237
PHA+G Y LK+ K A + F
Sbjct: 282 PHAVGAAYSLKMDKKDACAITYF 304
>05_07_0066 +
27453611-27453627,27454729-27454872,27455998-27456690,
27457700-27458111,27458220-27458297,27458938-27458953,
27459038-27459192
Length = 504
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 180 DGVRLVRVGAAHASVRQHSRQQSREGQRRVSSRQVTGLVQVLS 52
DG+ ++R G A+ + +QQ R RV+ + G+V L+
Sbjct: 302 DGMMMIRSGEQSAAATKAEKQQQRPAAHRVA--EAGGVVMALA 342
>03_05_0378 -
23619169-23619225,23619389-23619454,23620052-23620224,
23620454-23620664,23621056-23621280,23622157-23622493,
23624200-23624627
Length = 498
Score = 25.8 bits (54), Expect = 7.4
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = -2
Query: 177 GVRLVRVGAAHASVRQHSRQQSREGQRRVSSRQVTGLVQVLSGVCSGHRVDARLSES 7
G L GAA+ SVR + + +G R + S ++ G V L+ SG + A + +S
Sbjct: 425 GSDLAASGAANGSVRLWAIEPDSKGIRPLFSLRLDGFVNSLAIPKSGRFIVAGVGQS 481
>01_06_1842 - 40278875-40280131
Length = 418
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = -3
Query: 164 SASVQRTQASGSTAGSSPVRASAAYPLARSQAWCKSLAASVPDTAWMHAC 15
+A+ A+ + G +P R ++ P +RS + ++ AA+ P + AC
Sbjct: 220 AAAAATAPAAATAPGPAPARKVSSAPCSRSNSRGETSAAAPPPSIATAAC 269
>12_01_0281 + 2059397-2059721,2059807-2060675,2086761-2086910
Length = 447
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -3
Query: 170 GLSASVQRTQASGSTAGSSPVRASAAYPLARSQAWCKSLAASVPD 36
G SAS+ + + + SPVR PLA + ++ SV D
Sbjct: 329 GASASIDQVAKTAARVFGSPVRQPVVSPLAPGKEKKTAVETSVSD 373
>08_02_0323 - 15765631-15765903
Length = 90
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 119 SSPVRASAAYPLARSQAWCKSLAAS 45
S+P AS+A+PLA + A C A+S
Sbjct: 7 STPAPASSAFPLAAAAAACFPRASS 31
>07_03_1251 +
25186333-25188027,25188113-25188208,25188292-25188381,
25188473-25188577,25188764-25188823,25188931-25188993,
25189077-25189172,25189982-25190146,25191104-25191277,
25191387-25191452,25191556-25191654,25192714-25192857,
25193312-25193401
Length = 980
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = -3
Query: 125 AGSSPVRASAAYPLARSQA--WCKSLAASVPDTAWMHACL 12
A SP A+AA P R++A +C P ++ +H CL
Sbjct: 11 ASDSPA-AAAASPAVRAEALAYCARARDETPPSSLLHLCL 49
>07_03_0634 + 20125242-20125688
Length = 148
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 109 TGLLPAVLPDACVRCTDADKPHAIG 183
+G +P PDAC CT P A+G
Sbjct: 124 SGAVPLPTPDACAECT---YPRAVG 145
>06_03_0970 +
26424209-26424910,26425053-26425109,26425251-26425478,
26425788-26425881,26425955-26426161,26426581-26426711,
26426943-26426992,26427125-26427432,26427548-26427651,
26427810-26428526,26429159-26429338,26429703-26429831
Length = 968
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 147 HASVRQHSRQQSREGQRRVSSRQVTGLVQVLSGVCSGHRVDARLSESSC 1
+A V + +RQ R R + V+GL+ G C H + +S C
Sbjct: 762 NAMVIELNRQAERVSSSRGDTTSVSGLIHDERGPCRVHEEKSLHKKSKC 810
>02_05_0587 +
30162806-30163183,30163315-30163478,30163571-30163654,
30163737-30163794,30164092-30164145,30164244-30164309,
30164310-30164381,30164547-30164627,30165361-30165533,
30165916-30166018,30166148-30166279,30166432-30166554,
30166898-30167002,30167397-30167722,30167919-30168258,
30169973-30170113,30170589-30170801,30170901-30171119,
30171272-30171619,30171711-30172043,30172548-30172601
Length = 1188
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 116 SPVRASAAYPLARSQAWCKSLAASVP 39
SPVRASAA A + A ++ AA VP
Sbjct: 36 SPVRASAASASASAPAQREAAAAGVP 61
>01_06_1717 + 39404449-39405062,39405157-39406321
Length = 592
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 128 TAGSSPVRASAAYPLARSQAWCKSLAASVPDTA 30
TAG PV+ +A + A +A+ + +PD A
Sbjct: 502 TAGRKPVKVAAKFSSAFDEAYESQVHREIPDPA 534
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,182,324
Number of Sequences: 37544
Number of extensions: 143250
Number of successful extensions: 529
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 398975940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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