Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O22
         (319 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045642-5|AAC02582.1|  374|Caenorhabditis elegans Hypothetical ...    28   1.7  
Z93385-8|CAN86626.1|  560|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z93385-7|CAN86625.1|  556|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z93385-6|CAB07641.1|  558|Caenorhabditis elegans Hypothetical pr...    27   3.9  
Z46933-6|CAA87038.3|  321|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z46829-2|CAA86863.3|  321|Caenorhabditis elegans Hypothetical pr...    26   6.8  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    26   6.8  
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p...    25   8.9  
U41034-2|AAA82379.1|  915|Caenorhabditis elegans Hypothetical pr...    25   8.9  
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical...    25   8.9  

>AF045642-5|AAC02582.1|  374|Caenorhabditis elegans Hypothetical
           protein C17H12.3 protein.
          Length = 374

 Score = 27.9 bits (59), Expect = 1.7
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = +1

Query: 127 VLPDACVRCTDADKPHAIGDVYQLKVPNKQADIVVSFETTQSNEQSCKE 273
           ++PD    CT     H + D + + V  K   IV+  +T ++ +  C +
Sbjct: 145 MVPDKRFICTQGPLDHTVDDFWWMIVQQKVEQIVMLCKTIETGKYKCAQ 193


>Z93385-8|CAN86626.1|  560|Caenorhabditis elegans Hypothetical
           protein M01E5.3c protein.
          Length = 560

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 168 LVRVGAAHASVRQHSRQQSREGQRRVS 88
           L+ VG AHA  R+H   Q+ + QR  S
Sbjct: 417 LMVVGTAHAHYRRHMNAQAHQQQREPS 443


>Z93385-7|CAN86625.1|  556|Caenorhabditis elegans Hypothetical
           protein M01E5.3b protein.
          Length = 556

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 168 LVRVGAAHASVRQHSRQQSREGQRRVS 88
           L+ VG AHA  R+H   Q+ + QR  S
Sbjct: 417 LMVVGTAHAHYRRHMNAQAHQQQREPS 443


>Z93385-6|CAB07641.1|  558|Caenorhabditis elegans Hypothetical
           protein M01E5.3a protein.
          Length = 558

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 168 LVRVGAAHASVRQHSRQQSREGQRRVS 88
           L+ VG AHA  R+H   Q+ + QR  S
Sbjct: 417 LMVVGTAHAHYRRHMNAQAHQQQREPS 443


>Z46933-6|CAA87038.3|  321|Caenorhabditis elegans Hypothetical
           protein T14B1.2 protein.
          Length = 321

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 11  SDKRASTRCPEQTPLR 58
           S++RAS R PE TPLR
Sbjct: 303 SNRRASERPPEHTPLR 318


>Z46829-2|CAA86863.3|  321|Caenorhabditis elegans Hypothetical
           protein T14B1.2 protein.
          Length = 321

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 11  SDKRASTRCPEQTPLR 58
           S++RAS R PE TPLR
Sbjct: 303 SNRRASERPPEHTPLR 318


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 262  SCKELVMPLITQLVDK 309
            SCKEL +P +T L DK
Sbjct: 3553 SCKELQLPAVTVLTDK 3568


>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 70   ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDV 189
            +CD  RG  A ALT L  A LP        A+     G+V
Sbjct: 1576 SCDCRRGVRAAALTHLQRAFLPANMATLGAAEWQSCFGEV 1615


>U41034-2|AAA82379.1|  915|Caenorhabditis elegans Hypothetical
           protein M02D8.3 protein.
          Length = 915

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +2

Query: 5   EDSDKRASTRCPEQTPLRTCTR 70
           E++D  +S+  P +TP R+C R
Sbjct: 344 ENTDMNSSSDLPRKTPRRSCVR 365


>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
            protein C24H11.7 protein.
          Length = 1820

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 15/40 (37%), Positives = 18/40 (45%)
 Frame = +1

Query: 70   ACDLARGYAALALTGLLPAVLPDACVRCTDADKPHAIGDV 189
            +CD  RG  A ALT L  A LP        A+     G+V
Sbjct: 1576 SCDCRRGVRAAALTHLQRAFLPANMATLGAAEWQSCFGEV 1615


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,513,600
Number of Sequences: 27780
Number of extensions: 107273
Number of successful extensions: 346
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 346
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)