Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O22
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    25   0.29 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.29 
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    23   0.89 
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    23   0.89 
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    23   0.89 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   4.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   4.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   8.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   8.3  

>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 55  KDLHQACDLARGYAALA---LTGLLPAVLPDACVRCT 156
           K LH  C L RG+  +    +  LLP VL + C RCT
Sbjct: 35  KQLH--CILDRGHCDVIGKKIKELLPEVLNNHCNRCT 69


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.29
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 67  QACDLARGYAALALTGLLPAVLPDACV 147
           Q   +A    A ALTG  P +LP  C+
Sbjct: 463 QVDPMAASVVAAALTGTYPTLLPQWCL 489



 Score = 20.2 bits (40), Expect = 6.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 135 RQHSRQQSREGQRRVSSRQV 76
           +Q  RQQ R+ +RR+   ++
Sbjct: 168 QQQQRQQQRQEERRLRPDEI 187


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 106 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 213
           L  +LP  L   C +CTD  +   I  V +  V NK
Sbjct: 64  LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 106 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 213
           L  +LP  L   C +CTD  +   I  V +  V NK
Sbjct: 64  LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 23.0 bits (47), Expect = 0.89
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 106 LTGLLPAVLPDACVRCTDADKPHAIGDVYQLKVPNK 213
           L  +LP  L   C +CTD  +   I  V +  V NK
Sbjct: 64  LKRVLPDALATDCKKCTDKQR-EVIKKVIKFLVENK 98


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 77  SQAWCKSLAASVPDTAWMHACLNP 6
           S AW  S+  S+P T   H   +P
Sbjct: 158 SFAWIGSVVCSLPQTIVFHLETHP 181


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -2

Query: 180 DGVRLVRVGAAHASVRQHSRQQSREGQRRVSSRQ 79
           D   LV     H    QH   Q ++GQ +  ++Q
Sbjct: 159 DSPPLVESQMHHQMHTQHPHMQPQQGQHQSQAQQ 192


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 23  ASTRCPEQTPLRTCTRPVTWREDTRRWP 106
           A  RC   T  +     +TW +D R+ P
Sbjct: 348 AEFRCEVSTHPQAGPHFITWYKDGRQLP 375


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +2

Query: 23  ASTRCPEQTPLRTCTRPVTWREDTRRWP 106
           A  RC   T  +     +TW +D R+ P
Sbjct: 348 AEFRCEVSTHPQAGPHFITWYKDGRQLP 375


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,205
Number of Sequences: 438
Number of extensions: 1334
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)