Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O18
(219 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF308301-1|AAG48268.1| 205|Homo sapiens serologically defined b... 30 1.2
BC053362-1|AAH53362.1| 818|Homo sapiens UNK protein protein. 29 3.6
AB051540-1|BAB21844.1| 818|Homo sapiens KIAA1753 protein protein. 29 3.6
BC028074-1|AAH28074.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AY055015-2|AAL14717.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AY055015-1|AAL14716.1| 467|Homo sapiens stromal membrane-associ... 28 4.7
AY055004-1|AAL14715.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AY055003-1|AAL14714.1| 467|Homo sapiens stromal membrane-associ... 28 4.7
AL833906-1|CAD38762.1| 220|Homo sapiens hypothetical protein pr... 28 4.7
AL591049-4|CAI14242.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AL591049-3|CAI14241.1| 467|Homo sapiens stromal membrane-associ... 28 4.7
AL591049-2|CAI14240.1| 436|Homo sapiens stromal membrane-associ... 28 4.7
AL354943-6|CAI12311.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AL354943-5|CAI12312.1| 467|Homo sapiens stromal membrane-associ... 28 4.7
AL354943-4|CAI12310.1| 436|Homo sapiens stromal membrane-associ... 28 4.7
AL121961-5|CAI42147.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AL121961-4|CAI42148.1| 467|Homo sapiens stromal membrane-associ... 28 4.7
AL121961-3|CAI42146.1| 436|Homo sapiens stromal membrane-associ... 28 4.7
AK222711-1|BAD96431.1| 440|Homo sapiens stromal membrane-associ... 28 4.7
AK023221-1|BAB14473.1| 437|Homo sapiens protein ( Homo sapiens ... 28 4.7
AF442495-1|AAP97320.1| 440|Homo sapiens putative protein protein. 28 4.7
BC020974-1|AAH20974.1| 761|Homo sapiens sema domain, immunoglob... 28 6.2
AY358531-1|AAQ88895.1| 761|Homo sapiens semaphorin B protein. 28 6.2
AL135927-14|CAI15533.1| 629|Homo sapiens sema domain, immunoglo... 28 6.2
AL135927-12|CAI15531.1| 723|Homo sapiens sema domain, immunoglo... 28 6.2
AL135927-11|CAI15530.1| 761|Homo sapiens sema domain, immunoglo... 28 6.2
AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein. 28 6.2
>AF308301-1|AAG48268.1| 205|Homo sapiens serologically defined
breast cancer antigen NY-BR-87 protein.
Length = 205
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 87 GPFHGRGPVGSPQGRRGLPSSEFLQPG 7
GP G G P+GRR P ++ L+PG
Sbjct: 81 GPSRGSGGAQGPEGRRRAPRADGLEPG 107
>BC053362-1|AAH53362.1| 818|Homo sapiens UNK protein protein.
Length = 818
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 14 CRNSDEGSPRRPCGEPTG 67
CRNS GSP CG P G
Sbjct: 379 CRNSSLGSPSNLCGSPPG 396
>AB051540-1|BAB21844.1| 818|Homo sapiens KIAA1753 protein protein.
Length = 818
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 14 CRNSDEGSPRRPCGEPTG 67
CRNS GSP CG P G
Sbjct: 379 CRNSSLGSPSNLCGSPPG 396
>BC028074-1|AAH28074.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AY055015-2|AAL14717.1| 440|Homo sapiens stromal
membrane-associated protein SMAP1B protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AY055015-1|AAL14716.1| 467|Homo sapiens stromal
membrane-associated protein SMAP1A protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 387 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 415
>AY055004-1|AAL14715.1| 440|Homo sapiens stromal
membrane-associated protein SMAP1B protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AY055003-1|AAL14714.1| 467|Homo sapiens stromal
membrane-associated protein SMAP1A protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 387 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 415
>AL833906-1|CAD38762.1| 220|Homo sapiens hypothetical protein
protein.
Length = 220
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 140 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 168
>AL591049-4|CAI14242.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AL591049-3|CAI14241.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 387 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 415
>AL591049-2|CAI14240.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AL354943-6|CAI12311.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AL354943-5|CAI12312.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 387 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 415
>AL354943-4|CAI12310.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AL121961-5|CAI42147.1| 440|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AL121961-4|CAI42148.1| 467|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 467
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 387 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 415
>AL121961-3|CAI42146.1| 436|Homo sapiens stromal
membrane-associated protein 1 protein.
Length = 436
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AK222711-1|BAD96431.1| 440|Homo sapiens stromal
membrane-associated protein variant protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AK023221-1|BAB14473.1| 437|Homo sapiens protein ( Homo sapiens
cDNA FLJ13159 fis, clone NT2RP3003555, weakly similar to
HYPOTHETICAL 32.6 KD PROTEIN IN MET30-PIG2 INTERGENIC
REGION. ).
Length = 437
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>AF442495-1|AAP97320.1| 440|Homo sapiens putative protein protein.
Length = 440
Score = 28.3 bits (60), Expect = 4.7
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 105 LGHNIIGPFHGR-GPVGSPQGRRGLPSSE 22
L N++GP G G +G+PQ + GLP ++
Sbjct: 360 LPQNVVGPQGGMVGQMGAPQSKFGLPQAQ 388
>BC020974-1|AAH20974.1| 761|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 761
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 74 DEARWVRRRGDAGCPRPNSCSPG 6
+ +RW RG PRP SCS G
Sbjct: 360 ETSRWTTYRGPETNPRPGSCSVG 382
>AY358531-1|AAQ88895.1| 761|Homo sapiens semaphorin B protein.
Length = 761
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 74 DEARWVRRRGDAGCPRPNSCSPG 6
+ +RW RG PRP SCS G
Sbjct: 360 ETSRWTTYRGPETNPRPGSCSVG 382
>AL135927-14|CAI15533.1| 629|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 629
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 74 DEARWVRRRGDAGCPRPNSCSPG 6
+ +RW RG PRP SCS G
Sbjct: 228 ETSRWTTYRGPETNPRPGSCSVG 250
>AL135927-12|CAI15531.1| 723|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 723
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 74 DEARWVRRRGDAGCPRPNSCSPG 6
+ +RW RG PRP SCS G
Sbjct: 322 ETSRWTTYRGPETNPRPGSCSVG 344
>AL135927-11|CAI15530.1| 761|Homo sapiens sema domain,
immunoglobulin domain (Ig), transmembrane domain (TM)
and short cy protein.
Length = 761
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 74 DEARWVRRRGDAGCPRPNSCSPG 6
+ +RW RG PRP SCS G
Sbjct: 360 ETSRWTTYRGPETNPRPGSCSVG 382
>AB029394-1|BAB20087.1| 762|Homo sapiens SEMB protein.
Length = 762
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 74 DEARWVRRRGDAGCPRPNSCSPG 6
+ +RW RG PRP SCS G
Sbjct: 361 ETSRWTTYRGPETNPRPGSCSVG 383
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,959,010
Number of Sequences: 237096
Number of extensions: 755113
Number of successful extensions: 2385
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2385
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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