Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O17
(261 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical ... 28 1.1
Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical pr... 26 3.2
AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical... 26 3.2
Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 25 5.6
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 25 5.6
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 25 5.6
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 25 5.6
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 25 5.6
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical p... 25 5.6
U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor... 25 5.6
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 25 5.6
AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class I... 25 5.6
AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class I... 25 5.6
AY390548-1|AAQ94960.1| 352|Caenorhabditis elegans SMA-9 class I... 25 5.6
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 25 5.6
AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class I... 25 5.6
AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anch... 25 5.6
Z83229-3|CAB05740.3| 369|Caenorhabditis elegans Hypothetical pr... 25 7.4
AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical... 25 7.4
Z81509-8|CAB04157.2| 310|Caenorhabditis elegans Hypothetical pr... 25 9.8
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 25 9.8
AL023847-3|CAA19549.2| 309|Caenorhabditis elegans Hypothetical ... 25 9.8
AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine r... 25 9.8
AC006708-16|AAF60431.2| 312|Caenorhabditis elegans Hypothetical... 25 9.8
>AF068714-9|AAC17810.1| 87|Caenorhabditis elegans Hypothetical
protein B0348.1 protein.
Length = 87
Score = 27.9 bits (59), Expect = 1.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 27 WMSYFTGFFVFFVVLY 74
W+++F GFF+FF + Y
Sbjct: 43 WIAFFIGFFLFFPICY 58
>Z75552-2|CAA99944.1| 894|Caenorhabditis elegans Hypothetical
protein W04D2.1b protein.
Length = 894
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 114 YRPLLLHEPQVYRGVPAHVIYRTFIVGERESDV 212
+RP LL Q+++G P H + F + E+ D+
Sbjct: 192 HRPDLLDYSQLHKGDPIHNLNLAFDIAEKHLDI 224
>Z75552-1|CAA99941.1| 920|Caenorhabditis elegans Hypothetical
protein W04D2.1a protein.
Length = 920
Score = 26.6 bits (56), Expect = 2.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 114 YRPLLLHEPQVYRGVPAHVIYRTFIVGERESDV 212
+RP LL Q+++G P H + F + E+ D+
Sbjct: 192 HRPDLLDYSQLHKGDPIHNLNLAFDIAEKHLDI 224
>Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical
protein C01G12.7 protein.
Length = 584
Score = 26.2 bits (55), Expect = 3.2
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 21 IAWMSYFTGFFVFFVVLYLS 80
IAW+ +F GF + V+YL+
Sbjct: 191 IAWVDHFIGFALLIFVMYLA 210
>AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical
protein C15F1.1 protein.
Length = 360
Score = 26.2 bits (55), Expect = 3.2
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 144 LVVHVATTDDI-PNSNKSNINFQTNIKRQKKQ 52
L+VH+ + PNSNK N+ ++ + Q+KQ
Sbjct: 42 LIVHLTIFTGLHPNSNKFNLKWKKKKETQRKQ 73
>Z75527-3|CAA99777.1| 428|Caenorhabditis elegans Hypothetical
protein C15C8.3 protein.
Length = 428
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = -3
Query: 205 DSRSPTMKVLYITCAGTPRYTCGSCSNNGRY 113
DS S + V ITCAG TCGS + Y
Sbjct: 90 DSGSSNLWVPDITCAGGKDATCGSYCKSTPY 120
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1471 DIPNNQKSNCSSVSNVSPSNSQNFQ 1495
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1539 DIPNNQKSNCSSVSNVSPSNSQNFQ 1563
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1539 DIPNNQKSNCSSVSNVSPSNSQNFQ 1563
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1539 DIPNNQKSNCSSVSNVSPSNSQNFQ 1563
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1539 DIPNNQKSNCSSVSNVSPSNSQNFQ 1563
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1539 DIPNNQKSNCSSVSNVSPSNSQNFQ 1563
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 1097 DIPNNQKSNCSSVSNVSPSNSQNFQ 1121
>Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical
protein T05A10.1h protein.
Length = 537
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 187 DIPNNQKSNCSSVSNVSPSNSQNFQ 211
>Z66498-5|CAA91294.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +1
Query: 112 YIVRCCYMNHKCIAVFQRMLYIELS*LENVSPTSRFRYC 228
Y+ + C + ++C+ V R +I +SP+ F C
Sbjct: 311 YVTKGCKVGYQCVRVHMRKPHIAHVEYGEISPSESFADC 349
>Z54327-14|CAA91124.2| 513|Caenorhabditis elegans Hypothetical
protein C26D10.6a protein.
Length = 513
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = +1
Query: 112 YIVRCCYMNHKCIAVFQRMLYIELS*LENVSPTSRFRYC 228
Y+ + C + ++C+ V R +I +SP+ F C
Sbjct: 311 YVTKGCKVGYQCVRVHMRKPHIAHVEYGEISPSESFADC 349
>U23517-6|AAB93340.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein1, isoform a protein.
Length = 1280
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Frame = -3
Query: 214 WTSDSRSPTMKVLYIT-----CAGTPRYTCGSCSNNGRYTKFKQ 98
W DS P + I C R CGSC N + ++ Q
Sbjct: 538 WIPDSECPNCMLFTIITRRHHCRACGRVLCGSCCNEKAFLEYLQ 581
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 538 DIPNNQKSNCSSVSNVSPSNSQNFQ 562
>AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 537
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 187 DIPNNQKSNCSSVSNVSPSNSQNFQ 211
>AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 411
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 61 DIPNNQKSNCSSVSNVSPSNSQNFQ 85
>AY390548-1|AAQ94960.1| 352|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 352
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 2 DIPNNQKSNCSSVSNVSPSNSQNFQ 26
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 442 DIPNNQKSNCSSVSNVSPSNSQNFQ 466
>AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class IIa
protein.
Length = 468
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 117 DIPNSNKSNINFQTNIKRQKKQRIQ 43
DIPN+ KSN + +N+ Q Q
Sbjct: 119 DIPNNQKSNCSSVSNVSPSNSQNFQ 143
>AF045926-1|AAC24507.1| 1280|Caenorhabditis elegans A kinase anchor
protein protein.
Length = 1280
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Frame = -3
Query: 214 WTSDSRSPTMKVLYIT-----CAGTPRYTCGSCSNNGRYTKFKQ 98
W DS P + I C R CGSC N + ++ Q
Sbjct: 538 WIPDSECPNCMLFTIITRRHHCRACGRVLCGSCCNEKAFLEYLQ 581
>Z83229-3|CAB05740.3| 369|Caenorhabditis elegans Hypothetical
protein F54F11.3 protein.
Length = 369
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 55 FFLSFYICLKINVRFV*IWYIVRCCYM 135
F S L+ + FV +Y+++CCY+
Sbjct: 29 FPYSMLQALEFVLTFVSFYYVIKCCYV 55
>AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical
protein F40G9.1 protein.
Length = 636
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 34 VILLDSLFFLSFYICLKIN 90
VI L +F S ++CLKIN
Sbjct: 37 VIFLQEIFEKSLFLCLKIN 55
>Z81509-8|CAB04157.2| 310|Caenorhabditis elegans Hypothetical
protein F21A3.3 protein.
Length = 310
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = -3
Query: 214 WTSDSRSPTMKVLYITCAGTPRYTCGSCSNNGR 116
W S+ R + + A +CG C NNG+
Sbjct: 78 WKSEERCHWTRPISPFFADNCALSCGQCKNNGK 110
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -1
Query: 114 IPNSNKSNINFQTNIKRQKKQ 52
IPNS S INF+ + ++Q Q
Sbjct: 618 IPNSTSSRINFKQSGRQQSSQ 638
>AL023847-3|CAA19549.2| 309|Caenorhabditis elegans Hypothetical
protein Y57A10C.7 protein.
Length = 309
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 115 IVRCCYMNHKCIAVFQRMLYIELS 186
+V C +C+A+F +LY +LS
Sbjct: 106 VVSCSMALDRCLAIFSPVLYRQLS 129
>AF016449-11|AAG23992.1| 353|Caenorhabditis elegans Serpentine
receptor, class t protein7 protein.
Length = 353
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 37 ILLDSLFFLSFYICLKINVR 96
I+L+ L+FL F LK+N+R
Sbjct: 46 IVLEILYFLCFLAILKLNLR 65
>AC006708-16|AAF60431.2| 312|Caenorhabditis elegans Hypothetical
protein Y110A7A.7 protein.
Length = 312
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -3
Query: 229 HNI*IWTSDSRSPTMKVLYITCAGTPRYTCGSCSNNGRY 113
H + +W + T + + C GTP CSN RY
Sbjct: 239 HGVEVWFPGNM--TSQDTFKVCTGTPLNEDNLCSNTHRY 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,095,398
Number of Sequences: 27780
Number of extensions: 112678
Number of successful extensions: 344
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 12,740,198
effective HSP length: 65
effective length of database: 10,934,498
effective search space used: 229624458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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