Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O16
         (402 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051519-1|AAK92943.1|  343|Drosophila melanogaster GH17661p pro...    29   3.1  
AE014296-3486|AAO41282.1|  343|Drosophila melanogaster CG33056-P...    29   3.1  
AE014296-3485|AAO41281.1|  343|Drosophila melanogaster CG33056-P...    29   3.1  
AE014296-3484|AAN12157.1|  343|Drosophila melanogaster CG33056-P...    29   3.1  
AE014296-3483|AAF51686.3|  343|Drosophila melanogaster CG33056-P...    29   3.1  
AE014296-3482|AAO41280.1|  320|Drosophila melanogaster CG33056-P...    29   3.1  
AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p pro...    27   7.1  
AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubuli...    27   7.1  
AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA...    27   7.1  

>AY051519-1|AAK92943.1|  343|Drosophila melanogaster GH17661p
           protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
           H    I YLVT  +LY  +T+ DV  + +C
Sbjct: 66  HNARFIYYLVTKSSLYEASTYGDVQAALIC 95


>AE014296-3486|AAO41282.1|  343|Drosophila melanogaster CG33056-PE,
           isoform E protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
           H    I YLVT  +LY  +T+ DV  + +C
Sbjct: 66  HNARFIYYLVTKSSLYEASTYGDVQAALIC 95


>AE014296-3485|AAO41281.1|  343|Drosophila melanogaster CG33056-PD,
           isoform D protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
           H    I YLVT  +LY  +T+ DV  + +C
Sbjct: 66  HNARFIYYLVTKSSLYEASTYGDVQAALIC 95


>AE014296-3484|AAN12157.1|  343|Drosophila melanogaster CG33056-PB,
           isoform B protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
           H    I YLVT  +LY  +T+ DV  + +C
Sbjct: 66  HNARFIYYLVTKSSLYEASTYGDVQAALIC 95


>AE014296-3483|AAF51686.3|  343|Drosophila melanogaster CG33056-PA,
           isoform A protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
           H    I YLVT  +LY  +T+ DV  + +C
Sbjct: 66  HNARFIYYLVTKSSLYEASTYGDVQAALIC 95


>AE014296-3482|AAO41280.1|  320|Drosophila melanogaster CG33056-PC,
           isoform C protein.
          Length = 320

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 200 HKKTRIIYLVT*CALYSCATFSDVTRSCLC 111
           H    I YLVT  +LY  +T+ DV  + +C
Sbjct: 66  HNARFIYYLVTKSSLYEASTYGDVQAALIC 95


>AY118354-1|AAM48383.1| 1351|Drosophila melanogaster RE01412p
           protein.
          Length = 1351

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 3   RGFVYHPGPHHHLTADKIVVKALSL 77
           R FV  PGP  H  +DK++   L +
Sbjct: 223 RPFVAQPGPEKHFVSDKLLTNELKI 247


>AJ291605-1|CAC20097.1| 1351|Drosophila melanogaster gamma tubulin
           ring protein protein.
          Length = 1351

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 3   RGFVYHPGPHHHLTADKIVVKALSL 77
           R FV  PGP  H  +DK++   L +
Sbjct: 223 RPFVAQPGPEKHFVSDKLLTNELKI 247


>AE014296-2076|AAF49973.2| 1351|Drosophila melanogaster CG5688-PA
           protein.
          Length = 1351

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 3   RGFVYHPGPHHHLTADKIVVKALSL 77
           R FV  PGP  H  +DK++   L +
Sbjct: 223 RPFVAQPGPEKHFVSDKLLTNELKI 247


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,957,557
Number of Sequences: 53049
Number of extensions: 341245
Number of successful extensions: 525
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)