Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O15
(440 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 182 2e-47
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 182 2e-47
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 31 0.10
SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyce... 27 0.97
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 27 1.3
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.7
SPAC16E8.17c |||succinate-CoA ligase alpha subunit|Schizosacchar... 27 1.7
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 1.7
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 25 3.9
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 25 3.9
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 25 3.9
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 5.2
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 5.2
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 25 6.8
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 25 6.8
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 25 6.8
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 24 9.0
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 24 9.0
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 24 9.0
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 24 9.0
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 182 bits (443), Expect = 2e-47
Identities = 86/130 (66%), Positives = 103/130 (79%)
Frame = +3
Query: 33 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 212
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 213 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 392
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 393 LGRKKGAKLT 422
+G KG K T
Sbjct: 121 MG-SKGKKAT 129
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 182 bits (443), Expect = 2e-47
Identities = 86/130 (66%), Positives = 103/130 (79%)
Frame = +3
Query: 33 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRL 212
MGI+RD HKR ATG KRA RKKRK+ELGR +NT++GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 213 DTGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLP 392
D+GNF+WGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 393 LGRKKGAKLT 422
+G KG K T
Sbjct: 121 MG-SKGKKAT 129
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 30.7 bits (66), Expect = 0.10
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 45 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 218
RD +K + G K+ + EL +N + Q+ L+ S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 219 GNFAWGSECSTRKTRI 266
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPBC12C2.09c |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 324
Score = 27.5 bits (58), Expect = 0.97
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -3
Query: 135 WQPGDLTHTSSSYEWAHVC 79
W PG SS++W HVC
Sbjct: 278 WSPGKYDVFGSSHQWFHVC 296
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.1 bits (57), Expect = 1.3
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 126 PAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNFAWGSECSTRKTRIIDVVYNASNNELV 305
P NT + PQ RSR T R+L +G + S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 306 RTKTLVKNAIVVVDATPFRQWYE 374
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 26.6 bits (56), Expect = 1.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 338 DNSILYQGFGTHQFIVRGIINNI 270
+NS+ +Q F +H FI R +IN I
Sbjct: 541 ENSLYHQSFSSHWFISRLLINPI 563
>SPAC16E8.17c |||succinate-CoA ligase alpha
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 26.6 bits (56), Expect = 1.7
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +1
Query: 16 FLTQPRWVSVVIIGIRGGLRAANVRPFVRRGSMS*VARLPTLSLVPNAS 162
FL P +++IG GG + F+R + S P +S + A+
Sbjct: 228 FLDDPNTQGIILIGEIGGSAEEDAAEFIRAANASRSTPKPVVSFIAGAT 276
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.6 bits (56), Expect = 1.7
Identities = 23/86 (26%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Frame = +3
Query: 48 DHWHKRRATGGKRAPIRKKRKY---ELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDT 218
D W +A G +PIR+ ++Y +L P K H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKF-RDNYHKQNKRNREAKERGIGIKV 816
Query: 219 GNFAWGSECSTRKTRIIDVVYNASNN 296
N S RK R + A NN
Sbjct: 817 -NSELKSAVEIRKARELKEKRLAKNN 841
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.4 bits (53), Expect = 3.9
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 431 LSLSELGTFLPSEW 390
LSL+E GTFL EW
Sbjct: 1554 LSLNECGTFLQKEW 1567
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 18 SDPAKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAAN 137
S+ K G + RRA A RKK K + GRP +N
Sbjct: 2 SETTKSGSKKSGQTSRRAIHSCLACRRKKLKCDHGRPCSN 41
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 25.4 bits (53), Expect = 3.9
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 231 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPLGRK 404
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 405 K 407
+
Sbjct: 310 Q 310
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.0 bits (52), Expect = 5.2
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 83 FAARSPPLMPMITTDTHLGWVRKEK 9
F+ + L+P+ITT THL V +K
Sbjct: 1201 FSEKYTQLIPVITTYTHLSEVENKK 1225
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 5.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 381 YLLPLGRKKGAKLTE 425
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 24.6 bits (51), Expect = 6.8
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 18 SDPAK-MGISRDHWHKRRATGGKRAPIR 98
SDP + SR H H+ R+T K P R
Sbjct: 26 SDPVTVLDRSRTHHHRGRSTSSKAQPFR 53
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 24.6 bits (51), Expect = 6.8
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -2
Query: 187 LPPRDLTKWMRWG-PSL 140
L P+D+ KW RW PSL
Sbjct: 32 LSPQDILKWCRWTLPSL 48
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 24.6 bits (51), Expect = 6.8
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 48 DHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLDTGNF 227
+ W K T K+ +KRK L R A +L + + + S+GG +A + ++
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAKKNSSLD 90
Query: 228 AWGSE 242
A+ +E
Sbjct: 91 AFLNE 95
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 24.2 bits (50), Expect = 9.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 292 LEAL*TTSIIRVLRVEHSDPHAKFPVSRR 206
LE + T S +V R H DP K P RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 24.2 bits (50), Expect = 9.0
Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Frame = -2
Query: 229 AKFPVSRRRA-RYLVLPPRDLTKW 161
AK P+ +RR + L+L RDLT W
Sbjct: 420 AKKPILKRRTPQELLLSGRDLTPW 443
>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 902
Score = 24.2 bits (50), Expect = 9.0
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 233 PCEVSSIKTQGTIFSVTTTGSD 168
P V+SIK GT FS G+D
Sbjct: 768 PTAVASIKVSGTEFSTLLHGND 789
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 24.2 bits (50), Expect = 9.0
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 383 VVAFIPLPERRGIHHDNSI--LYQGFGTHQFIVRGIINN 273
++ F+ L E IH N LY+ F T +++GI++N
Sbjct: 100 LLPFLILEELMDIHTVNECAKLYEYFETRPSLMKGIVSN 138
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,001,384
Number of Sequences: 5004
Number of extensions: 42286
Number of successful extensions: 111
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -