Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O12
(398 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 56 6e-08
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 55 8e-08
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 55 8e-08
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 55 8e-08
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 45 1e-04
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 44 2e-04
BC043193-1|AAH43193.1| 527|Homo sapiens chromosome 4 open readi... 29 7.5
AY358785-1|AAQ89145.1| 519|Homo sapiens TCPD2512 protein. 29 7.5
AK172805-1|BAD18776.1| 331|Homo sapiens protein ( Homo sapiens ... 29 7.5
BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein. 28 9.9
BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone recepto... 28 9.9
BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein. 28 9.9
BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein. 28 9.9
BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein. 28 9.9
BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for IM... 28 9.9
BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein. 28 9.9
BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein. 28 9.9
AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone recepto... 28 9.9
AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone recepto... 28 9.9
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.6 bits (128), Expect = 6e-08
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L GV R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 55.2 bits (127), Expect = 8e-08
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +3
Query: 102 RNYDLGNGVLRFSKSRMYHKKAIYK----FVGXXXXXXXXXXXXTVVVKQIGGEKNGGTR 269
RN L G+ R+S+S MY +KA+YK V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 270 TVLLKSRKSFYPTQDKIRESFS 335
V L+ +YPT+D R+ S
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 44.8 bits (101), Expect = 1e-04
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +3
Query: 135 FSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYPTQD 314
+S+ MY +K Y V K +GG+KNGGTR V L+ +YPT+D
Sbjct: 2 YSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 315 KIRESFS 335
R+ S
Sbjct: 60 VPRKLLS 66
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 66 SHGKKPFSQHVRKLRASITPGTI 88
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/70 (32%), Positives = 32/70 (45%)
Frame = +3
Query: 126 VLRFSKSRMYHKKAIYKFVGXXXXXXXXXXXXTVVVKQIGGEKNGGTRTVLLKSRKSFYP 305
+ S+ MY +K Y V K +GG+KNGGTR V L+ +YP
Sbjct: 60 ICHVSRKAMYKRK--YSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 306 TQDKIRESFS 335
T+D R+ S
Sbjct: 118 TEDVPRKLLS 127
Score = 33.9 bits (74), Expect = 0.20
Identities = 14/23 (60%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +1
Query: 331 SHGKS-FSKHVRRTRPNLTPGTV 396
SHGK FS+HVR+ R ++TPGT+
Sbjct: 127 SHGKKPFSQHVRKLRASITPGTI 149
>BC043193-1|AAH43193.1| 527|Homo sapiens chromosome 4 open reading
frame 18 protein.
Length = 527
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 223 PSWLSK*AVKRMEALVQSC*KAGNHSTPLRTRSGSR 330
PSWLSK ++RM L S AG P+ +RSG+R
Sbjct: 213 PSWLSKDDIRRMRLLADSA-VAG--LRPVSSRSGAR 245
>AY358785-1|AAQ89145.1| 519|Homo sapiens TCPD2512 protein.
Length = 519
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 223 PSWLSK*AVKRMEALVQSC*KAGNHSTPLRTRSGSR 330
PSWLSK ++RM L S AG P+ +RSG+R
Sbjct: 213 PSWLSKDDIRRMRLLADSA-VAG--LRPVSSRSGAR 245
>AK172805-1|BAD18776.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ23966 fis, clone HEP16465. ).
Length = 331
Score = 28.7 bits (61), Expect = 7.5
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +1
Query: 223 PSWLSK*AVKRMEALVQSC*KAGNHSTPLRTRSGSR 330
PSWLSK ++RM L S AG P+ +RSG+R
Sbjct: 213 PSWLSKDDIRRMRLLADSA-VAG--LRPVSSRSGAR 245
>BC112350-1|AAI12351.1| 955|Homo sapiens THRAP3 protein protein.
Length = 955
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC112330-1|AAI12331.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC065519-1|AAH65519.1| 374|Homo sapiens THRAP3 protein protein.
Length = 374
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC054046-1|AAH54046.1| 373|Homo sapiens THRAP3 protein protein.
Length = 373
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC037554-1|AAH37554.1| 672|Homo sapiens THRAP3 protein protein.
Length = 672
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC019076-1|AAH19076.1| 373|Homo sapiens Unknown (protein for
IMAGE:3834482) protein.
Length = 373
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC010997-1|AAH10997.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>BC002501-1|AAH02501.1| 375|Homo sapiens THRAP3 protein protein.
Length = 375
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>AL591845-1|CAH71859.1| 955|Homo sapiens thyroid hormone receptor
associated protein 3 protein.
Length = 955
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
>AF117756-1|AAD22034.1| 955|Homo sapiens thyroid hormone
receptor-associated protein complex component TRAP150
protein.
Length = 955
Score = 28.3 bits (60), Expect = 9.9
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 283 KAGNHSTPLRTRSGSRSHGKSFSKHVRRTR 372
K+G+ S+ R+RS SRS +SFSK R+R
Sbjct: 8 KSGSRSS--RSRSASRSRSRSFSKSRSRSR 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,409,868
Number of Sequences: 237096
Number of extensions: 1164220
Number of successful extensions: 5880
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5863
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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