Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O10
(324 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0386 + 33555682-33556344,33557138-33557299 44 3e-05
07_01_0756 + 5819367-5820038,5820847-5821005 44 4e-05
07_03_0011 + 12370624-12370684,12372573-12372718,12372793-123731... 36 0.006
05_01_0214 - 1615519-1616775 34 0.029
05_01_0197 - 1417672-1417899,1418921-1418974,1419267-1419552,142... 32 0.090
03_05_0292 + 22846273-22846377,22847161-22847823 31 0.27
03_02_0261 - 6933962-6934513 31 0.27
09_04_0377 + 17086775-17088310 30 0.36
03_01_0031 + 292335-292844 30 0.36
10_07_0161 - 13674631-13675433,13675793-13675862 29 1.1
07_01_0768 - 5905493-5905740,5905953-5906037 28 1.5
06_03_0892 - 25713502-25714125,25714309-25715199 28 1.5
06_01_0964 - 7417158-7417517,7417596-7417868,7418400-7418810,741... 28 1.5
04_04_1609 + 34760576-34760688,34760781-34760948,34761566-347616... 28 1.5
10_02_0115 + 5445580-5445606,5446118-5446609 27 2.6
08_02_0707 - 20212190-20214592 27 2.6
03_05_0422 - 24076917-24077125,24077209-24077266,24077350-240773... 27 2.6
02_04_0551 + 23801464-23801802 27 2.6
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 27 3.4
12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937 27 3.4
07_01_1005 + 8509777-8509968,8510059-8510205,8510326-8510544,851... 27 3.4
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 27 4.5
04_04_0845 - 28646547-28646637,28646724-28646854,28647832-286479... 27 4.5
04_04_0534 + 26071227-26071811 26 5.9
04_03_0517 + 16712487-16712570,16713715-16714059,16714149-167143... 26 5.9
11_06_0639 - 25730092-25730224,25730867-25731045 26 7.8
08_01_0359 + 3152483-3152857,3154493-3154855,3155133-3155211,315... 26 7.8
07_01_0281 - 2067696-2068862 26 7.8
06_01_0715 - 5193648-5193897,5193987-5194255,5195011-5195350,519... 26 7.8
05_01_0354 + 2770515-2770655,2770767-2771380,2772152-2772341,277... 26 7.8
03_06_0720 + 35739383-35739391,35739802-35740275,35740695-357411... 26 7.8
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 44.0 bits (99), Expect = 3e-05
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2
Query: 206 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLRI 319
EG+ K+E IYL SLP+KE +I++ L P L DEV++I
Sbjct: 56 EGRFSKIEEIYLHSLPVKEHQIVE-TLVPGLKDEVMKI 92
Score = 31.9 bits (69), Expect = 0.12
Identities = 11/17 (64%), Positives = 17/17 (100%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLV 201
++++++WVPVTKLGRLV
Sbjct: 38 RQEEEKWVPVTKLGRLV 54
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 43.6 bits (98), Expect = 4e-05
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +2
Query: 206 EGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLRI 319
E KI K+E IYL SLP+KE +I++ L P L DEV++I
Sbjct: 59 ENKIHKIEEIYLHSLPVKEHQIVE-QLVPGLKDEVMKI 95
Score = 31.9 bits (69), Expect = 0.12
Identities = 11/17 (64%), Positives = 17/17 (100%)
Frame = +1
Query: 151 KEDQKEWVPVTKLGRLV 201
++++++WVPVTKLGRLV
Sbjct: 41 RQEEEKWVPVTKLGRLV 57
>07_03_0011 +
12370624-12370684,12372573-12372718,12372793-12373129,
12374323-12374452,12375346-12375406,12375572-12375618,
12376873-12376950,12377195-12377345,12377495-12377558,
12377735-12377893,12378007-12378128,12378952-12378981,
12379050-12379124,12379563-12379644,12379809-12379938,
12381417-12382164,12382833-12383054,12383127-12383276,
12384851-12384904,12384985-12385058,12386130-12386204,
12386365-12386584
Length = 1071
Score = 36.3 bits (80), Expect = 0.006
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 51 WRFP-RRLWIPWWRQRSWRPTWSWSRTRARPWPWQGRP 161
W F RR WIPW +R+ + WS S T R W Q RP
Sbjct: 184 WSFEWRRGWIPWEARRASKSAWSQSSTGTRKW-MQYRP 220
>05_01_0214 - 1615519-1616775
Length = 418
Score = 33.9 bits (74), Expect = 0.029
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 148 HGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVH 44
HGHG DHDH G D HH G+ H H
Sbjct: 190 HGHGHGHSHDHDH-GGSDHDHHHHEDQEHGHVHHH 223
>05_01_0197 -
1417672-1417899,1418921-1418974,1419267-1419552,
1421768-1422291
Length = 363
Score = 32.3 bits (70), Expect = 0.090
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 45 WTWRFPRRLWIPWWRQRSWRP 107
W WR P RL W R RSW P
Sbjct: 140 WLWRRPSRLLSKWRRGRSWAP 160
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 30.7 bits (66), Expect = 0.27
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 87 RQRSWRPTWSWSRTRAR 137
R+RSWR WSW R R R
Sbjct: 157 RRRSWRRQWSWRRRRRR 173
>03_02_0261 - 6933962-6934513
Length = 183
Score = 30.7 bits (66), Expect = 0.27
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 87 RQRSWRPTWSWSRTRAR 137
R+RSWR WSW R R R
Sbjct: 116 RRRSWRRQWSWRRRRRR 132
>09_04_0377 + 17086775-17088310
Length = 511
Score = 30.3 bits (65), Expect = 0.36
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +3
Query: 51 WRFPRRLWIPWWRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWS 194
+R RR W P+ R R W+R R P P +G GA AWS
Sbjct: 62 YRDRRRQWSPYHRDRGRDVEREWARDRDHPAPRRGGG---GAGAGAWS 106
>03_01_0031 + 292335-292844
Length = 169
Score = 30.3 bits (65), Expect = 0.36
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 72 WIPWWRQRSWRPTWSWSR 125
W W R+R WR W W R
Sbjct: 39 WRRWRRRRGWRRRWGWQR 56
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +3
Query: 48 TWRFPRRLWI---PWWRQR-SWRPTWSWSRTRARPWPWQGRPERVGASHQAWS 194
+WR P W+ PW Q+ +WRP S W G P G SH W+
Sbjct: 229 SWR-PAGPWVCFNPWPAQQLAWRPPPPPSPLSWSSWAGSGGPLFPGTSHLRWA 280
>07_01_0768 - 5905493-5905740,5905953-5906037
Length = 110
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
Frame = +3
Query: 108 TWSW-----SRTR-ARPWPWQGRPERVGASHQAWSPCPV 206
TW+W R R A P PW+ R E G H + C V
Sbjct: 2 TWTWRLLLAERPRMAPPHPWEPRAEAAGVRHVRGTSCAV 40
>06_03_0892 - 25713502-25714125,25714309-25715199
Length = 504
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 178 LAPTLSGLPCHGHGRARVRDHDHVGRHDLCRHHG 77
L P+ GLP GH V HV DL R HG
Sbjct: 35 LPPSPWGLPVIGHLHHLVGALPHVAMRDLARRHG 68
>06_01_0964 -
7417158-7417517,7417596-7417868,7418400-7418810,
7419270-7419347
Length = 373
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 170 GCQSPSLVALSCEGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVLRIM 322
GC + SL +L C+G ++K E + F+LPI GPS +DEV+ I+
Sbjct: 242 GCVAKSLESLVCKGLVNK-EKLESFNLPI---------YGPS-DDEVMEIV 281
>04_04_1609 +
34760576-34760688,34760781-34760948,34761566-34761634,
34762125-34762247,34762296-34762501,34762723-34762729,
34762961-34763006,34763092-34763151,34763249-34763317,
34763790-34763873,34764178-34764263,34764859-34764949,
34765029-34765109,34765191-34765265,34765392-34765526
Length = 470
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 254 WEERIGKCSQACRFCLHRTRRPSLVTGTHSF 162
WE R+ K +CL+ T S GTHSF
Sbjct: 147 WEVRMTKAYVCISYCLNATNVHSPSKGTHSF 177
>10_02_0115 + 5445580-5445606,5446118-5446609
Length = 172
Score = 27.5 bits (58), Expect = 2.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 72 WIPWWRQRSWRPTWS 116
W+ W R+R WR WS
Sbjct: 27 WVAWRRRRRWRIRWS 41
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 151 CHGHGRARVRDHDHVGRHDLCRHHGIQSRRGNRHVHRLELRPPLL 17
CHGH DH H HD HH ++ + + P +L
Sbjct: 580 CHGH------DHHHHHHHDHSEHHQQSGDHAHQDISNISSDPAIL 618
>03_05_0422 -
24076917-24077125,24077209-24077266,24077350-24077399,
24077494-24077754,24077837-24078230,24081256-24081366,
24082255-24082596
Length = 474
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 85 HHGIQSRRGNRHVHRLELRPP 23
HH RRG+RH +LRPP
Sbjct: 5 HHHHHPRRGSRHAAAGDLRPP 25
>02_04_0551 + 23801464-23801802
Length = 112
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 81 WWRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWSPC 200
W R RS R W R R P PW+ R + W+ C
Sbjct: 30 WSRSRSRR---HWRRRR-EPRPWRRRQRGAAGGGRTWTTC 65
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 178 LAPTLSGLPCHGHG---RARVRDHDHVGR-HDLCRHH 80
+AP L L C G G R RVR +VGR H L RHH
Sbjct: 76 VAPCLLTLQCSGVGWGVRKRVR---YVGRHHHLARHH 109
>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
Length = 418
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/37 (51%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Frame = -3
Query: 178 LAPTLSGLPCHGHG---RARVRDHDHVGR-HDLCRHH 80
+AP L L C G G R RVR +VGR H L RHH
Sbjct: 67 VAPCLLTLQCSGVGWGVRKRVR---YVGRHHHLARHH 100
>07_01_1005 +
8509777-8509968,8510059-8510205,8510326-8510544,
8510652-8510761,8511337-8511391,8511447-8511631,
8512537-8512599,8513713-8513782,8514159-8514242,
8515925-8516159,8516213-8516517
Length = 554
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +3
Query: 48 TWRFPRRLWI-PWWRQRSWRPTWSWSRTRARPWPWQGRPERVGASHQAWSPCPVKAKSTS 224
T+ FP + PWW S P + S + + + R GA+H+A PV A
Sbjct: 482 TFSFPASTTLSPWWSPPSPHPRATSSPSTSPRCSPRAETARQGAAHEAAKLQPVAAHPLQ 541
Query: 225 LRAF 236
L +
Sbjct: 542 LSTY 545
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 148 HGHGRARVRDHDHVGRHDLCRHH 80
HGH H H G H RHH
Sbjct: 546 HGHSHGDHHHHYHGGHHQRRRHH 568
>04_04_0845 -
28646547-28646637,28646724-28646854,28647832-28647938,
28648043-28648121,28648578-28648667,28648814-28649065,
28649367-28649519,28649631-28649955,28650069-28650283
Length = 480
Score = 26.6 bits (56), Expect = 4.5
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 138 PWPWQGRPERVGAS 179
PW WQG+PE G +
Sbjct: 403 PWRWQGKPEITGGT 416
>04_04_0534 + 26071227-26071811
Length = 194
Score = 26.2 bits (55), Expect = 5.9
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +3
Query: 63 RRLWIPWWRQRSWRPTWSWSRTRARP--WPWQGRPERVGASH 182
RR W R +WR +W RT ++P +P G P G H
Sbjct: 104 RRRDCAWRRPAAWRWLTTWRRTASKPDGYP-SGMPVPDGHEH 144
>04_03_0517 +
16712487-16712570,16713715-16714059,16714149-16714301,
16714889-16714972,16715426-16715479,16715552-16715647,
16716163-16716258,16716941-16717086,16717650-16717799,
16717889-16718018,16718128-16718787,16718881-16718979,
16719058-16719210,16719323-16720054,16720338-16720640
Length = 1094
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2
Query: 185 SLVALSCEGKIDKLESIYLFSLPIKEF 265
+++A + EGKI +LES+ +LP +EF
Sbjct: 711 AVIAQTREGKIARLESLMDGTLPTEEF 737
>11_06_0639 - 25730092-25730224,25730867-25731045
Length = 103
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 7/31 (22%)
Frame = +3
Query: 96 SWRPTWSWSR-------TRARPWPWQGRPER 167
+WRP W W + T AR W W R R
Sbjct: 56 AWRPRWWWGQGARSQEATMARRWWWGPRSSR 86
>08_01_0359 +
3152483-3152857,3154493-3154855,3155133-3155211,
3155473-3155879,3156342-3156497,3156728-3156895,
3156991-3157131,3157739-3157966,3158063-3158176,
3158293-3158448
Length = 728
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = -3
Query: 91 CRHHGIQSRRGNRHVH-RLELRPPLL---NDHLV 2
C HHG +GNR +L+ + P L N HLV
Sbjct: 531 CSHHGTMHIKGNRQYSCKLKFKEPSLLDRNPHLV 564
>07_01_0281 - 2067696-2068862
Length = 388
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 136 RARVRDHDHVGRHDLCRHHGIQSRRGNRHVHRL 38
RAR R G HD Q +RG H+H L
Sbjct: 70 RARARHDQGGGAHDHHHDRPRQDQRGEAHLHDL 102
>06_01_0715 -
5193648-5193897,5193987-5194255,5195011-5195350,
5195691-5195845,5196547-5196557,5197632-5197689,
5197855-5198004,5198074-5198169,5198398-5198818,
5198835-5198950,5199041-5199149,5199483-5199532,
5200936-5201004,5201366-5201459,5201550-5201820,
5202273-5202607,5202718-5202786,5202834-5202904
Length = 977
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 235 LPILSSHQRV*DHRFLPWAFTQR*SPED 318
LP L+ Q DHR L W FT+ D
Sbjct: 910 LPALAIRQSDSDHRILRWKFTRECKQSD 937
>05_01_0354 +
2770515-2770655,2770767-2771380,2772152-2772341,
2772570-2772634,2772719-2773214
Length = 501
Score = 25.8 bits (54), Expect = 7.8
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = +3
Query: 111 WSWSRTRARPWPWQGRPERVGASHQAW 191
W W T PW + R + GA W
Sbjct: 250 WGWPETNIEPWSKEFRDIKEGAKAIKW 276
>03_06_0720 +
35739383-35739391,35739802-35740275,35740695-35741122,
35741273-35741351
Length = 329
Score = 25.8 bits (54), Expect = 7.8
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 105 PTWSWSRTRARPWPWQGRPERVGASHQAWSPCPVKAKSTS 224
P S S R W Q +P+R G S A S A++TS
Sbjct: 217 PPPSSSNPSERAWQQQQQPQRAGKSPAAASDAMDAARTTS 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,011,520
Number of Sequences: 37544
Number of extensions: 151931
Number of successful extensions: 632
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 423156300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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