Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O08
         (293 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical pr...    39   5e-04
U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical pr...    37   0.003
U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical pr...    36   0.004
AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical ...    34   0.020
Z69717-3|CAA93534.1|  617|Caenorhabditis elegans Hypothetical pr...    33   0.027
AL009170-1|CAA15637.1|  617|Caenorhabditis elegans Hypothetical ...    33   0.027
U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase ...    32   0.082
AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threon...    32   0.082
Z74042-2|CAA98528.2|  379|Caenorhabditis elegans Hypothetical pr...    31   0.11 
AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical ...    30   0.33 
U40800-4|AAO91742.1|  763|Caenorhabditis elegans Hypothetical pr...    27   2.3  
AF016687-6|AAC48092.3|  309|Caenorhabditis elegans Serpentine re...    26   4.1  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    26   4.1  
Z68319-3|CAA92701.1|  339|Caenorhabditis elegans Hypothetical pr...    26   5.4  
Z75955-6|CAB00120.1|  451|Caenorhabditis elegans Hypothetical pr...    25   7.1  
AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome re...    25   7.1  
Z82082-1|CAB04962.1|  110|Caenorhabditis elegans Hypothetical pr...    25   9.4  
U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g ...    25   9.4  
U41508-1|AAG00027.3|  944|Caenorhabditis elegans Set (trithorax/...    25   9.4  

>U64845-4|AAC48029.1|  623|Caenorhabditis elegans Hypothetical
           protein F45F2.7 protein.
          Length = 623

 Score = 39.1 bits (87), Expect = 5e-04
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
 Frame = +2

Query: 11  HEADLNDILLRVSAFGLFVYAV--FCIIAGGMGAFTHEPSLLVMITGCXXXXXXXXXXXF 184
           H   +++ILL +   G  +Y    F +I  G    +H P+L + +              +
Sbjct: 454 HGEVIDEILLIIGLVGELIYCSIGFDMIVNGNRTGSHVPNLPIAVF-TFRIIQVIIQAMY 512

Query: 185 IADVSRLRVHLPEQERSKPARQAVTFLLICNVTMWL 292
           I   SRLR       R++P +Q +TFL++ N+T+++
Sbjct: 513 ILIASRLRCLSEVNARTQPGKQTLTFLVLINITLFV 548


>U64845-6|AAC48028.1|  556|Caenorhabditis elegans Hypothetical
           protein F45F2.5 protein.
          Length = 556

 Score = 36.7 bits (81), Expect = 0.003
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
 Frame = +2

Query: 11  HEADLNDILLRVSAFGLFVYAVFCIIAGGMGAFTHEP-SLLVMITGCXXXXXXXXXXXFI 187
           H   +++ILL V   G  VY+   +          EP S + +++             FI
Sbjct: 389 HGEVIDEILLIVGLAGECVYSCAGMDLYINDKMIKEPASYITIVSFTLRITEVLVQTIFI 448

Query: 188 ADVSRLRVHLPEQERSKPARQAVTFLLICNVTMWL 292
              +R+R +      ++P +Q +TFLL+CN+ +++
Sbjct: 449 LIATRMRCYTQTNCYTEPGKQVITFLLVCNINLFI 483


>U64845-5|AAC48027.1|  581|Caenorhabditis elegans Hypothetical
           protein F45F2.6 protein.
          Length = 581

 Score = 36.3 bits (80), Expect = 0.004
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = +2

Query: 11  HEADLNDILLRVSAFGLFVYAVFCIIAGGMGAFTHEP--SLLVMITGCXXXXXXXXXXXF 184
           H   +++ILL V   G  VY    +     G   + P  S L ++              F
Sbjct: 415 HGQVVDEILLIVGLAGEIVYCSTGLDLYLNGRLENTPGTSCLTVVAFVMRIVQVVVQSVF 474

Query: 185 IADVSRLRVHLPEQERSKPARQAVTFLLICNVTMWL 292
           I   SRLR        ++P +Q VTFL++CN+ +++
Sbjct: 475 ILVASRLRSLSASNISNQPGKQIVTFLVVCNINLFI 510


>AF016414-5|AAG24020.1|  585|Caenorhabditis elegans Hypothetical
           protein D1065.1 protein.
          Length = 585

 Score = 33.9 bits (74), Expect = 0.020
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 1/95 (1%)
 Frame = +2

Query: 11  HEADLNDILLRVSAFGLFVYAVFCIIAGGMGAFTHEP-SLLVMITGCXXXXXXXXXXXFI 187
           H   ++DILL V   G  VY+   I           P   + MI              FI
Sbjct: 418 HGEVIDDILLIVGLAGECVYSCAAIDLYVNEKLMDRPVPYITMIAFSLRITEVIVQTLFI 477

Query: 188 ADVSRLRVHLPEQERSKPARQAVTFLLICNVTMWL 292
              +R+R         +P +Q +TFLLICN+ +++
Sbjct: 478 LIAARMRSS--PLSNKQPGKQVITFLLICNINLFI 510


>Z69717-3|CAA93534.1|  617|Caenorhabditis elegans Hypothetical
           protein H19J13.1 protein.
          Length = 617

 Score = 33.5 bits (73), Expect = 0.027
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 182 FIADVSRLRVHLPEQERSKPARQAVTFLLICNVTMWL 292
           FI   SRLR       + KP ++ +TFLL+ NVT+++
Sbjct: 491 FILTTSRLRCLSKYSMKYKPGKEIITFLLVSNVTLFV 527


>AL009170-1|CAA15637.1|  617|Caenorhabditis elegans Hypothetical
           protein H19J13.1 protein.
          Length = 617

 Score = 33.5 bits (73), Expect = 0.027
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +2

Query: 182 FIADVSRLRVHLPEQERSKPARQAVTFLLICNVTMWL 292
           FI   SRLR       + KP ++ +TFLL+ NVT+++
Sbjct: 491 FILTTSRLRCLSKYSMKYKPGKEIITFLLVSNVTLFV 527


>U40416-1|AAA81410.2|  822|Caenorhabditis elegans Protein kinase
           protein 29 protein.
          Length = 822

 Score = 31.9 bits (69), Expect = 0.082
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 129 SKLGS*VKAPIPPAIMQKTAYTKSPNAETRSKMSLRSASCRIQ 1
           ++LG  ++ PIP    Q+T YTK+P AE RS  +  S S + Q
Sbjct: 569 NQLGGGIQNPIPR--YQRTPYTKAPPAERRSSWASPSLSAQQQ 609


>AF403714-1|AAK97497.1|  822|Caenorhabditis elegans serine/threonine
           kinase KIN-29 protein.
          Length = 822

 Score = 31.9 bits (69), Expect = 0.082
 Identities = 18/43 (41%), Positives = 26/43 (60%)
 Frame = -3

Query: 129 SKLGS*VKAPIPPAIMQKTAYTKSPNAETRSKMSLRSASCRIQ 1
           ++LG  ++ PIP    Q+T YTK+P AE RS  +  S S + Q
Sbjct: 569 NQLGGGIQNPIPR--YQRTPYTKAPPAERRSSWASPSLSAQQQ 609


>Z74042-2|CAA98528.2|  379|Caenorhabditis elegans Hypothetical
           protein T11F9.3 protein.
          Length = 379

 Score = 31.5 bits (68), Expect = 0.11
 Identities = 18/50 (36%), Positives = 30/50 (60%)
 Frame = +3

Query: 93  AEWEPSLTNLAYWS**LDVLAYFRWSCSYSLLLTCLDFEYISQNRNEASR 242
           A+WE +  +L +++  L++ A FR + +Y    TCL FEY ++N   A R
Sbjct: 36  AKWENNKMSLFFYNLPLEMQAMFRDAINYLENHTCLKFEY-NENAETAVR 84


>AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical
           protein B0212.1 protein.
          Length = 649

 Score = 29.9 bits (64), Expect = 0.33
 Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
 Frame = +2

Query: 23  LNDILLRVSAFGLFVYAVFCIIA-GGMGAFTHEPSLLVMITGCXXXXXXXXXXXFIADVS 199
           L+ ILL +   G  +Y+V  ++   G   +T+   +L+ +              F+  V+
Sbjct: 487 LDQILLSIGLVGELIYSVAGLVGLTGEKQWTNFSFILLFVH--IFRLIQVGTQTFLLHVA 544

Query: 200 RLRVHLPEQERSKPARQAVTFLLICNVTMW 289
           R      E   ++P +QA+TFLL  N+ ++
Sbjct: 545 RSVRMGCEHREAQPGKQAITFLLTANLAIF 574


>U40800-4|AAO91742.1|  763|Caenorhabditis elegans Hypothetical
           protein D2096.12 protein.
          Length = 763

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -2

Query: 115 VSEGSHSAGNNAENSVHEKSKCRNTKQDVVEICLVPNS 2
           V  G HSA  N  N V  KS  +N  Q   +    PNS
Sbjct: 136 VGIGVHSAVANTRNGVMTKSAAKNNYQTTSQAPASPNS 173


>AF016687-6|AAC48092.3|  309|Caenorhabditis elegans Serpentine
           receptor, class h protein282 protein.
          Length = 309

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 141 LDVLAYFRWSCSYSLLLTCLDFEYI 215
           L +L +  WS +Y +++TC+   Y+
Sbjct: 47  LHLLNFLMWSMAYDMIMTCVGQPYL 71


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +3

Query: 150 LAYFRWSCSYSLLLTCLDFEYISQNRNEASRRV 248
           L YF   C YS +L  L FE++ +  + +SRR+
Sbjct: 44  LVYFYGFCVYSNILYWLYFEFV-ERADHSSRRI 75


>Z68319-3|CAA92701.1|  339|Caenorhabditis elegans Hypothetical
           protein T23G7.3 protein.
          Length = 339

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 14/58 (24%), Positives = 26/58 (44%)
 Frame = -2

Query: 205 KSRHVSNKE*LQDHLKYAKTSSYHDQ*ARFVSEGSHSAGNNAENSVHEKSKCRNTKQD 32
           KS+ +  +   Q   +   TS+Y D   + +        +NAE  + EK++  + K D
Sbjct: 120 KSKSIRRRIHYQKFTRAKDTSNYSDSHKKGILGYGRLKSDNAEEKIEEKTENSSVKSD 177


>Z75955-6|CAB00120.1|  451|Caenorhabditis elegans Hypothetical
           protein R07B7.11 protein.
          Length = 451

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 204 FEYISQNRNEASRRVKLLLSCLSAMSPCG 290
           F Y+++N  E  +R+++ L+ +    P G
Sbjct: 340 FAYLNRNEKEGYKRIEIQLASIGLTDPAG 368


>AF016440-3|AAB65906.1|  443|Caenorhabditis elegans Proteasome
           regulatory particle,atpase-like protein 2 protein.
          Length = 443

 Score = 25.4 bits (53), Expect = 7.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = -3

Query: 108 KAPIPPAIMQKTAYTKSPNAETRSKMSLRSASCRIQ 1
           +APIP  I +K   +K P+A ++       A CR++
Sbjct: 29  EAPIPSRIGKKKKGSKGPDAASKLPAVTPHARCRLK 64


>Z82082-1|CAB04962.1|  110|Caenorhabditis elegans Hypothetical
           protein ZC334.1 protein.
          Length = 110

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 225 CSGRCTRSRDTSAIKS 178
           C+G+CTR+ D   IKS
Sbjct: 72  CNGQCTRNYDALVIKS 87


>U46669-3|AAA85744.2|  737|Caenorhabditis elegans Regulator of g
           protein signalingprotein 6 protein.
          Length = 737

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = -3

Query: 153 LRHPVIMTSKLGS*VKAPIPPAIMQKTAYTKSPNAETRSKMS 28
           +RHP I ++K+G    A    A    +A + S + +T++  S
Sbjct: 631 IRHPAIFSTKIGDEAAAAAAGASPSTSAPSTSTSVQTKTTTS 672


>U41508-1|AAG00027.3|  944|Caenorhabditis elegans Set
           (trithorax/polycomb) domaincontaining protein 19
           protein.
          Length = 944

 Score = 25.0 bits (52), Expect = 9.4
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = -3

Query: 216 RCTRSRDTSAIKSNCRTT*STLRHPVIMTSKLGS*VKAPIPPAIMQKTAYTKSPNAETRS 37
           R +R R+    ++  +TT    R PV + S       +PIP  + Q++   +SP +E R+
Sbjct: 591 RASRCRERVTRRTRLQTT--PARVPVELESV------SPIPARVRQRSPEVQSPKSEMRT 642

Query: 36  KMSLR 22
           +   R
Sbjct: 643 RSRAR 647


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,607,014
Number of Sequences: 27780
Number of extensions: 111659
Number of successful extensions: 307
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 291481146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)