Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O06
         (179 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-P...    26   6.1  
AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-P...    26   6.1  

>AE014134-2567|AAS64744.1| 1259|Drosophila melanogaster CG15270-PB,
           isoform B protein.
          Length = 1259

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
 Frame = +1

Query: 64  YVLYNYFLM*IKNIYHKLEAWEK*------RWAAMSVPPYLLGP 177
           +VL++ F +   ++Y  LEAW++       RW  +S PP LL P
Sbjct: 337 HVLFSLFNVAWASLY--LEAWKRYSVELAFRWGTLSTPPELLEP 378


>AE014134-2566|AAF53439.1| 1338|Drosophila melanogaster CG15270-PA,
           isoform A protein.
          Length = 1338

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
 Frame = +1

Query: 64  YVLYNYFLM*IKNIYHKLEAWEK*------RWAAMSVPPYLLGP 177
           +VL++ F +   ++Y  LEAW++       RW  +S PP LL P
Sbjct: 337 HVLFSLFNVAWASLY--LEAWKRYSVELAFRWGTLSTPPELLEP 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,721,728
Number of Sequences: 53049
Number of extensions: 106602
Number of successful extensions: 190
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 24,988,368
effective HSP length: 40
effective length of database: 22,866,408
effective search space used: 434461752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)