Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O05
         (269 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M32405-1|AAA36568.1|  145|Homo sapiens protein ( Human homologue...    79   3e-15
J02984-1|AAA36036.1|  145|Homo sapiens protein ( Human insulinom...    79   3e-15
BC141832-1|AAI41833.1|  145|Homo sapiens ribosomal protein S15 p...    79   3e-15
BC105810-1|AAI05811.1|  145|Homo sapiens ribosomal protein S15 p...    79   3e-15
BC064908-1|AAH64908.1|  145|Homo sapiens ribosomal protein S15 p...    79   3e-15
AF145025-1|AAP97277.1|  145|Homo sapiens insulinoma protein prot...    79   3e-15
AF536542-1|AAN77183.1|  916|Homo sapiens SR-related CTD associat...    28   4.6  

>M32405-1|AAA36568.1|  145|Homo sapiens protein ( Human homologue of
           rat insulinoma gene (rig), exons 1-4. ).
          Length = 145

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = +2

Query: 86  VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 265
           VDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+VKTH
Sbjct: 20  VDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTH 79

Query: 266 L 268
           L
Sbjct: 80  L 80


>J02984-1|AAA36036.1|  145|Homo sapiens protein ( Human insulinoma
           rig-analog mRNA encoding DNA-binding protein, complete
           cds. ).
          Length = 145

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = +2

Query: 86  VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 265
           VDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+VKTH
Sbjct: 20  VDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTH 79

Query: 266 L 268
           L
Sbjct: 80  L 80


>BC141832-1|AAI41833.1|  145|Homo sapiens ribosomal protein S15
           protein.
          Length = 145

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = +2

Query: 86  VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 265
           VDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+VKTH
Sbjct: 20  VDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTH 79

Query: 266 L 268
           L
Sbjct: 80  L 80


>BC105810-1|AAI05811.1|  145|Homo sapiens ribosomal protein S15
           protein.
          Length = 145

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = +2

Query: 86  VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 265
           VDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+VKTH
Sbjct: 20  VDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTH 79

Query: 266 L 268
           L
Sbjct: 80  L 80


>BC064908-1|AAH64908.1|  145|Homo sapiens ribosomal protein S15
           protein.
          Length = 145

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = +2

Query: 86  VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 265
           VDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+VKTH
Sbjct: 20  VDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTH 79

Query: 266 L 268
           L
Sbjct: 80  L 80


>AF145025-1|AAP97277.1|  145|Homo sapiens insulinoma protein
           protein.
          Length = 145

 Score = 78.6 bits (185), Expect = 3e-15
 Identities = 38/61 (62%), Positives = 45/61 (73%)
 Frame = +2

Query: 86  VDLDQLLDMPNEQLMELMHXXXXXXXXXGLKRKPMALVKKLRRAKKEAPPNEKPEIVKTH 265
           VDLDQLLDM  EQLM+L           GL+RK  +L+K+LR+AKKEAPP EKPE+VKTH
Sbjct: 20  VDLDQLLDMSYEQLMQLYSARQRRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTH 79

Query: 266 L 268
           L
Sbjct: 80  L 80


>AF536542-1|AAN77183.1|  916|Homo sapiens SR-related CTD associated
           factor 6 protein.
          Length = 916

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 162 NRLRARACINSMSCSLGMSRS*SKST 85
           +R R+R+C  S SCS   SRS S+S+
Sbjct: 765 SRSRSRSCSRSSSCSRSRSRSRSRSS 790


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,800,224
Number of Sequences: 237096
Number of extensions: 626371
Number of successful extensions: 1249
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 76,859,062
effective HSP length: 67
effective length of database: 60,973,630
effective search space used: 1341419860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)