Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O03
(351 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221... 84 3e-17
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120... 83 6e-17
03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524... 83 6e-17
11_01_0807 - 7178278-7178548,7178629-7178756,7178847-7179815,718... 29 1.4
04_04_1655 - 35089916-35091157 28 1.8
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 28 2.4
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 2.4
08_02_1140 + 24649869-24651029 27 3.1
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 27 3.1
09_02_0568 + 10748227-10748434,10749004-10749398 26 7.2
06_01_0393 + 2831676-2831876,2831986-2832101,2832340-2832421,283... 26 7.2
02_04_0090 - 19643182-19643322,19644192-19644335,19644563-196446... 26 7.2
02_01_0455 + 3266123-3266258,3266348-3266670,3267083-3267661,326... 26 7.2
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 26 9.6
08_02_0409 + 16837792-16837896,16839256-16839328,16839376-168397... 26 9.6
01_06_0454 - 29506637-29508175 26 9.6
>02_02_0482 -
10819562-10819813,10820773-10820952,10822073-10822150,
10823056-10823256,10823365-10823550,10823646-10823783,
10824396-10824501,10824634-10824692
Length = 399
Score = 83.8 bits (198), Expect = 3e-17
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
K RVFEVSLADLQ D D +++RK RL A+DVQGRNVL NF GM T+DKLR +V+KWQT
Sbjct: 62 KHRVFEVSLADLQNDED--QAYRKVRLRAEDVQGRNVLTNFWGMSFTTDKLRSLVKKWQT 119
Query: 348 L 350
L
Sbjct: 120 L 120
Score = 76.2 bits (179), Expect = 7e-15
Identities = 32/46 (69%), Positives = 40/46 (86%)
Frame = +2
Query: 44 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
VDPF++KDWYD+KAP++F+ R +G TLV+RTQGTKIASEGLK F
Sbjct: 21 VDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTKIASEGLKHRVF 66
>12_02_0012 -
12309332-12310228,12311087-12311669,12311945-12312051,
12313190-12313237,12315139-12315216,12315300-12315500,
12315612-12315797,12315870-12316007,12318311-12318416,
12318529-12318587
Length = 800
Score = 83.0 bits (196), Expect = 6e-17
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
K RVFEVSLADLQ D D +++RK RL A+DVQG+NVL NF GM T+DKLR +V+KWQT
Sbjct: 62 KHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQT 119
Query: 348 L 350
L
Sbjct: 120 L 120
Score = 77.0 bits (181), Expect = 4e-15
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = +2
Query: 44 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
VDPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK F
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTKIASEGLKHRVF 66
>03_02_0043 +
5242496-5242554,5242673-5242778,5243586-5243723,
5243794-5243979,5244075-5244275,5244362-5244460
Length = 262
Score = 83.0 bits (196), Expect = 6e-17
Identities = 41/61 (67%), Positives = 49/61 (80%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
K RVFEVSLADLQ D D +++RK RL A+DVQG+NVL NF GM T+DKLR +V+KWQT
Sbjct: 62 KHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQT 119
Query: 348 L 350
L
Sbjct: 120 L 120
Score = 76.6 bits (180), Expect = 5e-15
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +2
Query: 44 VDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
VDPF +KDWYD+KAPS+F R +G TLV+RTQGTKIASEGLK F
Sbjct: 21 VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTKIASEGLKHRVF 66
>11_01_0807 -
7178278-7178548,7178629-7178756,7178847-7179815,
7180465-7180518,7180622-7180798,7180913-7181926,
7182038-7182101,7182247-7182563,7182797-7182847
Length = 1014
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 69 GTMLKRRPCSPRDKWAPPLSIAP 137
G + R PC PRDK+ P S+ P
Sbjct: 206 GAYIVRLPCGPRDKYLPKESLWP 228
>04_04_1655 - 35089916-35091157
Length = 413
Score = 28.3 bits (60), Expect = 1.8
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 275 ITSLDIVSDKSELAERPF-RITISLEISKGDLKNTPLLDPQMQFLFPGC 132
+ L +V+ + ER R +L + +N+P L P +Q L+P C
Sbjct: 365 VEKLCVVAQSEQCGERTRERARETLRLHARAWRNSPCLQPHLQALYPSC 413
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SLTMSRDVMFSAISTAWTSPVISSDG 327
SL S D+ FS I +AW ++SDG
Sbjct: 409 SLESSLDIDFSTIPSAWNDDDVTSDG 434
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 27.9 bits (59), Expect = 2.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 250 SLTMSRDVMFSAISTAWTSPVISSDG 327
SL S D+ FS I +AW ++SDG
Sbjct: 466 SLESSLDIDFSTIPSAWNDDDVTSDG 491
>08_02_1140 + 24649869-24651029
Length = 386
Score = 27.5 bits (58), Expect = 3.1
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +1
Query: 112 GHHPCQSHPGNKNCI*GSKRGVFLRSPLLISRLIVMRKGLSASSDLSL 255
GH+ S P + + G KRG+ L +P +I + ++KG DL L
Sbjct: 188 GHY---SDPNSLIRLSGPKRGISLENPAVIEYDLKIKKGEDEKDDLQL 232
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = -2
Query: 323 SELITGEVHAVEIAENITSLDIVSDKSELAER 228
+EL G A +IA+NIT + D+S+LAE+
Sbjct: 390 NELHNGGQGADDIAKNITGIVKADDQSQLAEK 421
>09_02_0568 + 10748227-10748434,10749004-10749398
Length = 200
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 72 TMLKRRPCSPRDKWAPPLSIAPREQK 149
T+ KR+P RDK P++ AP +K
Sbjct: 163 TVAKRKPLQGRDKVGIPITPAPSNEK 188
>06_01_0393 +
2831676-2831876,2831986-2832101,2832340-2832421,
2832515-2832671,2832755-2832848,2833942-2834008,
2834464-2835009
Length = 420
Score = 26.2 bits (55), Expect = 7.2
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 170 LLDPQMQFLFPGCD*QGWCP 111
LL + F F GC GWCP
Sbjct: 89 LLAAHVVFFFVGCGGLGWCP 108
>02_04_0090 -
19643182-19643322,19644192-19644335,19644563-19644626,
19644710-19644796,19645371-19645513,19645706-19645771,
19645954-19646046,19646165-19646230,19646363-19646433,
19646882-19646982,19647217-19647317,19647421-19647528,
19647639-19648064
Length = 536
Score = 26.2 bits (55), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 207 PGDQQGRPQKHAPFRP 160
P ++GRP +HAPF P
Sbjct: 18 PPHRRGRPPRHAPFLP 33
>02_01_0455 +
3266123-3266258,3266348-3266670,3267083-3267661,
3267866-3268336
Length = 502
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 187 SPLLISRLIVMRKGLSASSDLSLTMSRDVMFSAISTAWTSPVISSDGW 330
SPL IS + ++ + L ++ ++ ++++T WTS + GW
Sbjct: 155 SPLYISEMAPAQQRGMLNILFQLMITVGILSASLTTYWTSKIAGGWGW 202
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 25.8 bits (54), Expect = 9.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 114 APPLSIAPREQKLHLRV*KGRVFEVSLADLQADSDAERSFRKFRLIADD 260
A L P++ + HL + V+L L D FR+F++ DD
Sbjct: 629 AKKLGWDPKDGESHLNAMLRPMLLVALVQLGHDKTINEGFRRFQIFFDD 677
>08_02_0409 +
16837792-16837896,16839256-16839328,16839376-16839730,
16839995-16840106
Length = 214
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -1
Query: 222 PHHYQPGDQQGRPQKHAPFRPSDAIFV 142
P H P +QG P+ P P A F+
Sbjct: 150 PQHVSPELKQGSPKMERPLLPRPATFI 176
>01_06_0454 - 29506637-29508175
Length = 512
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 115 AHLSLGEHGRRFNIVPVFTGERINNLLLNTLLASFRL 5
AH G G RF + V G+R+ +L + A R+
Sbjct: 21 AHRLCGAGGDRFEVAVVEAGDRVGGRILTSEFAGHRV 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,865,057
Number of Sequences: 37544
Number of extensions: 198510
Number of successful extensions: 594
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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