Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O03
(351 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 89 5e-18
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 89 5e-18
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 89 5e-18
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 89 5e-18
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 89 5e-18
BC047686-1|AAH47686.1| 565|Homo sapiens bridging integrator 2 p... 28 7.2
AK000783-1|BAA91376.1| 342|Homo sapiens protein ( Homo sapiens ... 28 7.2
AF146531-1|AAD54227.1| 564|Homo sapiens bridging integrator-2 p... 28 7.2
AB032710-1|BAA88125.1| 565|Homo sapiens breast cancer associate... 28 7.2
AB032698-1|BAA88108.1| 565|Homo sapiens breast cancer associate... 28 7.2
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 88.6 bits (210), Expect = 5e-18
Identities = 43/61 (70%), Positives = 50/61 (81%)
Frame = +3
Query: 168 KGRVFEVSLADLQADSDAERSFRKFRLIADDVQGRNVLCNFHGMDLTSDKLRWMVRKWQT 347
KGRVFEVSLADLQ D E +FRKF+LI +DVQG+N L NFHGMDLT DK+ MV+KWQT
Sbjct: 63 KGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQT 119
Query: 348 L 350
+
Sbjct: 120 M 120
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/47 (72%), Positives = 40/47 (85%)
Frame = +2
Query: 41 IVDPFTRKDWYDVKAPSMFTKRQVGTTLVNRTQGTKIASEGLKGACF 181
+VDPF++KDWYDVKAP+MF R +G TLV RTQGTKIAS+GLKG F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC047686-1|AAH47686.1| 565|Homo sapiens bridging integrator 2
protein.
Length = 565
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 202 SRLIVMRKGLSASSDLSLTMSRDVMFSAISTAWTSPVISS 321
S + + KGLS+SS SL +S V + +S+ TSP S
Sbjct: 243 SNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSPTSPS 282
>AK000783-1|BAA91376.1| 342|Homo sapiens protein ( Homo sapiens
cDNA FLJ20776 fis, clone COL05962. ).
Length = 342
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 202 SRLIVMRKGLSASSDLSLTMSRDVMFSAISTAWTSPVISS 321
S + + KGLS+SS SL +S V + +S+ TSP S
Sbjct: 20 SNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSPTSPS 59
>AF146531-1|AAD54227.1| 564|Homo sapiens bridging integrator-2
protein.
Length = 564
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 202 SRLIVMRKGLSASSDLSLTMSRDVMFSAISTAWTSPVISS 321
S + + KGLS+SS SL +S V + +S+ TSP S
Sbjct: 242 SNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSPTSPS 281
>AB032710-1|BAA88125.1| 565|Homo sapiens breast cancer associated
protein BRAP1 protein.
Length = 565
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 202 SRLIVMRKGLSASSDLSLTMSRDVMFSAISTAWTSPVISS 321
S + + KGLS+SS SL +S V + +S+ TSP S
Sbjct: 243 SNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSPTSPS 282
>AB032698-1|BAA88108.1| 565|Homo sapiens breast cancer associated
protein BRAP1 protein.
Length = 565
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 202 SRLIVMRKGLSASSDLSLTMSRDVMFSAISTAWTSPVISS 321
S + + KGLS+SS SL +S V + +S+ TSP S
Sbjct: 243 SNKVFVVKGLSSSSRRSLVISPPVRTATVSSPLTSPTSPS 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,626,517
Number of Sequences: 237096
Number of extensions: 1091316
Number of successful extensions: 2338
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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