Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O02
(251 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033512-2|CAA22074.1| 390|Caenorhabditis elegans Hypothetical ... 29 0.58
Z34801-4|CAA84328.1| 236|Caenorhabditis elegans Hypothetical pr... 27 2.3
CU457744-2|CAM36368.1| 169|Caenorhabditis elegans Hypothetical ... 26 3.1
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 25 5.4
AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical ... 25 5.4
AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical ... 25 5.4
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 25 7.1
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 25 7.1
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 25 7.1
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 25 7.1
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 25 7.1
AF067212-1|AAC16997.3| 160|Caenorhabditis elegans Hypothetical ... 25 7.1
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 25 9.4
>AL033512-2|CAA22074.1| 390|Caenorhabditis elegans Hypothetical
protein Y49A3A.3 protein.
Length = 390
Score = 28.7 bits (61), Expect = 0.58
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 94 DSAYCPYNGVHSIDHYKLHLHLVRCGKQHPRAKIAK 201
D CP +G H+I L +HL RC + A+ K
Sbjct: 50 DRMVCPNDGKHTILKADLEIHLTRCNSRIRDAEYIK 85
>Z34801-4|CAA84328.1| 236|Caenorhabditis elegans Hypothetical
protein F59A2.3 protein.
Length = 236
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 28 KSTSKDNLRSSKTIKMAAPRPYDSA 102
+S S+ LRSS+ ++MAAPR + +
Sbjct: 8 RSLSRVALRSSQVVRMAAPRHFSQS 32
>CU457744-2|CAM36368.1| 169|Caenorhabditis elegans Hypothetical
protein T06A10.3 protein.
Length = 169
Score = 26.2 bits (55), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +1
Query: 97 SAYCPYNGVHSIDHYKLHLHLVRC 168
S CPYN H + + + HL +C
Sbjct: 18 SITCPYNSDHKVSMEEFNTHLWKC 41
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 25.4 bits (53), Expect = 5.4
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +2
Query: 59 QKQLKWQHRDHTIVP-IAPTMGYILL 133
+ Q KW RDH I P I G+IL+
Sbjct: 11 EAQQKWLGRDHLITPTIKKAFGHILV 36
>AF016673-2|ABS19461.1| 320|Caenorhabditis elegans Hypothetical
protein T06D4.1b protein.
Length = 320
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 237 TSSTTWTESLRAFGNFCTR 181
TSS+TWT L +F N +R
Sbjct: 110 TSSSTWTAELESFANELSR 128
>AF016673-1|AAB66121.1| 441|Caenorhabditis elegans Hypothetical
protein T06D4.1a protein.
Length = 441
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 237 TSSTTWTESLRAFGNFCTR 181
TSS+TWT L +F N +R
Sbjct: 231 TSSSTWTAELESFANELSR 249
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 248 DISRLHRRHGPSRYGHLAIFARGCCLPHLTKCRCSL*WSIECTP 117
DI+ + RRH +R GH + C + C+L +IEC P
Sbjct: 344 DITTVARRHASNRLGHDTTILQ-CLNTICSILNCTL--TIECEP 384
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 248 DISRLHRRHGPSRYGHLAIFARGCCLPHLTKCRCSL*WSIECTP 117
DI+ + RRH +R GH + C + C+L +IEC P
Sbjct: 344 DITTVARRHASNRLGHDTTILQ-CLNTICSILNCTL--TIECEP 384
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 248 DISRLHRRHGPSRYGHLAIFARGCCLPHLTKCRCSL*WSIECTP 117
DI+ + RRH +R GH + C + C+L +IEC P
Sbjct: 415 DITTVARRHASNRLGHDTTILQ-CLNTICSILNCTL--TIECEP 455
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 112 YNGVHSIDHYKLHLHLVRCGKQH 180
Y ++S+ Y+ LH+VRC +H
Sbjct: 177 YTILNSMHKYQPRLHVVRCADRH 199
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 248 DISRLHRRHGPSRYGHLAIFARGCCLPHLTKCRCSL*WSIECTP 117
DI+ + RRH +R GH + C + C+L +IEC P
Sbjct: 344 DITTVARRHASNRLGHDTTILQ-CLNTICSILNCTL--TIECEP 384
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 248 DISRLHRRHGPSRYGHLAIFARGCCLPHLTKCRCSL*WSIECTP 117
DI+ + RRH +R GH + C + C+L +IEC P
Sbjct: 344 DITTVARRHASNRLGHDTTILQ-CLNTICSILNCTL--TIECEP 384
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -1
Query: 248 DISRLHRRHGPSRYGHLAIFARGCCLPHLTKCRCSL*WSIECTP 117
DI+ + RRH +R GH + C + C+L +IEC P
Sbjct: 415 DITTVARRHASNRLGHDTTILQ-CLNTICSILNCTL--TIECEP 455
>AF067212-1|AAC16997.3| 160|Caenorhabditis elegans Hypothetical
protein F37F2.2 protein.
Length = 160
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +3
Query: 135 PLQTAPAFSEVRQTASACKNCQMPVATRSMSSMKSRNII 251
P TAP+ + A+ KN + ++T+ + K +N+I
Sbjct: 119 PGYTAPSVASSSAAAAGKKNKKKKISTKKIKLYKKKNLI 157
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 171 QTASACKNCQMPVATRSMSSM 233
Q +S CKNCQ + + S +S+
Sbjct: 1772 QNSSQCKNCQKALESHSSTSI 1792
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 24.6 bits (51), Expect = 9.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 171 QTASACKNCQMPVATRSMSSM 233
Q +S CKNCQ + + S +S+
Sbjct: 1772 QNSSQCKNCQKALESHSSTSI 1792
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,182,561
Number of Sequences: 27780
Number of extensions: 117560
Number of successful extensions: 314
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 219801160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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