Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_O02
         (251 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    21   3.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   3.1  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    21   3.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   3.1  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    21   3.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   5.5  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    19   7.3  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    19   9.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   9.6  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 196 QFLHADAVCRT 164
           +F H DA CRT
Sbjct: 51  RFKHTDACCRT 61


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 56  LQKQLKWQHRDHTIVPIAPTMGYIL 130
           +QK ++  H  HT +  A  +GY++
Sbjct: 319 MQKYVQMIHDLHTRISTAIDLGYVV 343


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 196 QFLHADAVCRT 164
           +F H DA CRT
Sbjct: 56  RFKHTDACCRT 66


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 56  LQKQLKWQHRDHTIVPIAPTMGYIL 130
           +QK ++  H  HT +  A  +GY++
Sbjct: 319 MQKYVQMIHDLHTRISTAIDLGYVV 343


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 20.6 bits (41), Expect = 3.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 196 QFLHADAVCRT 164
           +F H DA CRT
Sbjct: 56  RFKHTDACCRT 66


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.8 bits (39), Expect = 5.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = +2

Query: 173 NSIRVQKLPNARSDSVHVVDEVE 241
           +SI + +LP    D + ++D+V+
Sbjct: 333 DSIDMMQLPIQLDDGIDILDDVK 355


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 19.4 bits (38), Expect = 7.3
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = +2

Query: 23  SRNQHQRTIFDLQKQLKWQHRDHT 94
           S+N+ QR   +  ++ + + R+H+
Sbjct: 60  SKNEQQRKEMEQMREREREQREHS 83


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -2

Query: 238 DFIDDMDRVATGIWQFLHADAVCRT 164
           +F+D  D   +G W  ++  A   T
Sbjct: 188 NFVDLSDYWKSGTWDIINVPAYLNT 212


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 9.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 105 IGTIVWSRCCHFNC 64
           IG I WS+   F+C
Sbjct: 127 IGRIQWSKLQVFDC 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,626
Number of Sequences: 438
Number of extensions: 1217
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4527252
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)