Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_O01
(178 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 1.8
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 1.8
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 20 2.4
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 20 2.4
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 20 3.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 19 7.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 19 7.3
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 19 7.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 19 7.3
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 19 7.3
M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee homeobox-... 18 9.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 18 9.6
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 143 LYLQVYISADLT 108
LYL VY+ AD T
Sbjct: 106 LYLNVYVPADRT 117
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 143 LYLQVYISADLT 108
LYL VY+ AD T
Sbjct: 106 LYLNVYVPADRT 117
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 20.2 bits (40), Expect = 2.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 68 VNSTGAVALSATRVSDPLIY 127
+ S G + SAT + DP+ Y
Sbjct: 383 LESFGVMGDSATAMRDPIFY 402
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 20.2 bits (40), Expect = 2.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2
Query: 132 SIYISGSDTRVA 97
SIY GSD RVA
Sbjct: 34 SIYSGGSDWRVA 45
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.8 bits (39), Expect = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 126 YISGSDTRVALNATAPVEFTAATLL 52
Y+S + T + P TAATL+
Sbjct: 829 YLSAAATSSTSTSPRPASSTAATLV 853
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = +2
Query: 98 ATRVSDPLIYILVNKV 145
+T + DP Y+L K+
Sbjct: 412 STSMRDPAFYMLYQKI 427
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 18.6 bits (36), Expect = 7.3
Identities = 5/14 (35%), Positives = 7/14 (50%)
Frame = +1
Query: 67 CKFHWCCRVECHTC 108
C++ C CH C
Sbjct: 737 CRYEAHCFALCHCC 750
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 18.6 bits (36), Expect = 7.3
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 178 HITRLIIYSILNFI 137
HI ++ YS+L I
Sbjct: 37 HIVSIVFYSVLMII 50
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 18.6 bits (36), Expect = 7.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Frame = -3
Query: 176 HNSVNYLFYSELYLQVYISADLTHVWHSTRQHQ 78
H S+N S LYL +++ T + Q
Sbjct: 249 HQSINKEARSNLYLPFHLTLSFRDFRDRTTEQQ 281
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 18.6 bits (36), Expect = 7.3
Identities = 9/33 (27%), Positives = 14/33 (42%)
Frame = -3
Query: 176 HNSVNYLFYSELYLQVYISADLTHVWHSTRQHQ 78
H S+N S LYL +++ T + Q
Sbjct: 244 HQSINKEARSNLYLPFHLTLSFRDFRDRTTEQQ 276
>M29492-1|AAA27727.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H40. ).
Length = 74
Score = 18.2 bits (35), Expect = 9.6
Identities = 6/26 (23%), Positives = 12/26 (46%)
Frame = -3
Query: 143 LYLQVYISADLTHVWHSTRQHQWNLQ 66
L L + ++ +W R+ +W Q
Sbjct: 41 LALSLSLTETQVKIWFQNRRTKWKKQ 66
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 18.2 bits (35), Expect = 9.6
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = +2
Query: 44 SSSRSVAAVNSTGAVALSATRVSDPLIYILVNKVQNRID 160
S S ++V+ T + + T +SD ++ +N NR++
Sbjct: 95 SPSSFFSSVSPTSLGSENYTGISDLFVFDDLNDYINRLN 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,824
Number of Sequences: 438
Number of extensions: 810
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 38
effective length of database: 129,699
effective search space used: 2593980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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